c2pfam

AT1G61870.1 :

Domain Description Evalue Bits GA Start End
GGA_N-GAT GGA N-GAT domain 0.075 2 25.60 44 61
PPR_2 PPR repeat family 0.75 -1 30.00 125 147
PPR PPR repeat 0.0072 6 25.00 125 145
PPR_1 PPR repeat 0.87 -2 23.80 128 141
PPR_long Pentacotripeptide-repeat region of PRORP 1.6E-09 26 27.00 130 225
PPR_3 Pentatricopeptide repeat domain 9.1E-11 31 25.00 137 197
PPR_2 PPR repeat family 1.3E-11 34 30.00 151 198
PPR PPR repeat 5.9E-05 12 25.00 153 179
ECSIT Evolutionarily conserved signalling intermediate in Toll pathway 0.00042 8 21.90 179 198
PPR_1 PPR repeat 5E-07 18 23.80 182 214
PPR_2 PPR repeat family 3.3E-13 39 30.00 185 232
GGA_N-GAT GGA N-GAT domain 0.023 3 25.60 186 196
PPR PPR repeat 3.8E-07 19 25.00 189 218
PPR_3 Pentatricopeptide repeat domain 1.1E-08 24 25.00 208 264
ECSIT Evolutionarily conserved signalling intermediate in Toll pathway 0.35 -1 21.90 209 232
PPR_1 PPR repeat 0.0017 7 23.80 216 232
PPR PPR repeat 2.6E-05 14 25.00 224 253
PPR_2 PPR repeat family 6.6E-11 31 30.00 227 269
ECSIT Evolutionarily conserved signalling intermediate in Toll pathway 0.75 -2 21.90 244 269
PPR_1 PPR repeat 4.1E-07 19 23.80 252 283
PPR_long Pentacotripeptide-repeat region of PRORP 1.9E-08 23 27.00 256 356
PPR_2 PPR repeat family 2.9E-16 49 30.00 257 304
PPR PPR repeat 1.5E-07 21 25.00 258 287
PPR_3 Pentatricopeptide repeat domain 9.9E-11 31 25.00 279 335
PPR_1 PPR repeat 3.3E-14 41 23.80 287 319
PPR_2 PPR repeat family 3.5E-18 55 30.00 290 339
PPR PPR repeat 1.7E-11 33 25.00 293 323
GGA_N-GAT GGA N-GAT domain 0.0098 5 25.60 304 320
PPR_1 PPR repeat 7.7E-08 21 23.80 321 352
PPR_2 PPR repeat family 0.00025 10 30.00 330 373
PPR PPR repeat 0.00024 10 25.00 332 356
PPR_2 PPR repeat family 0.0057 6 30.00 365 389
PPR PPR repeat 2.7E-05 13 25.00 366 391
PPR_1 PPR repeat 0.00062 9 23.80 367 385

408

GGA_N-GAT
PPR_2
PPR
PPR_1
PPR_long
PPR_3
PPR_2
PPR
ECSIT
PPR_1
PPR_2
GGA_N-GAT
PPR
PPR_3
ECSIT
PPR_1
PPR
PPR_2
ECSIT
PPR_1
PPR_long
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR
GGA_N-GAT
PPR_1
PPR_2
PPR
PPR_2
PPR
PPR_1

References:

ECSIT
10465784 ECSIT is an evolutionarily conserved intermediate in the Toll/IL-1 signal transduction pathway. Genes Dev 1999;13:2059-2071.

GGA_N-GAT

PPR_long

PPR_3

PPR_2

PPR_1

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

Domain	Description	Evalue	Bits	GA	Start	End
GGA_N-GAT	GGA N-GAT domain	0.075	2	25.60	44	61
PPR_2	PPR repeat family	0.75	-1	30.00	125	147
PPR	PPR repeat	0.0072	6	25.00	125	145
PPR_1	PPR repeat	0.87	-2	23.80	128	141
PPR_long	Pentacotripeptide-repeat region of PRORP	1.6E-09	26	27.00	130	225
PPR_3	Pentatricopeptide repeat domain	9.1E-11	31	25.00	137	197
PPR_2	PPR repeat family	1.3E-11	34	30.00	151	198
PPR	PPR repeat	5.9E-05	12	25.00	153	179
ECSIT	Evolutionarily conserved signalling intermediate in Toll pathway	0.00042	8	21.90	179	198
PPR_1	PPR repeat	5E-07	18	23.80	182	214
PPR_2	PPR repeat family	3.3E-13	39	30.00	185	232
GGA_N-GAT	GGA N-GAT domain	0.023	3	25.60	186	196
PPR	PPR repeat	3.8E-07	19	25.00	189	218
PPR_3	Pentatricopeptide repeat domain	1.1E-08	24	25.00	208	264
ECSIT	Evolutionarily conserved signalling intermediate in Toll pathway	0.35	-1	21.90	209	232
PPR_1	PPR repeat	0.0017	7	23.80	216	232
PPR	PPR repeat	2.6E-05	14	25.00	224	253
PPR_2	PPR repeat family	6.6E-11	31	30.00	227	269
ECSIT	Evolutionarily conserved signalling intermediate in Toll pathway	0.75	-2	21.90	244	269
PPR_1	PPR repeat	4.1E-07	19	23.80	252	283
PPR_long	Pentacotripeptide-repeat region of PRORP	1.9E-08	23	27.00	256	356
PPR_2	PPR repeat family	2.9E-16	49	30.00	257	304
PPR	PPR repeat	1.5E-07	21	25.00	258	287
PPR_3	Pentatricopeptide repeat domain	9.9E-11	31	25.00	279	335
PPR_1	PPR repeat	3.3E-14	41	23.80	287	319
PPR_2	PPR repeat family	3.5E-18	55	30.00	290	339
PPR	PPR repeat	1.7E-11	33	25.00	293	323
GGA_N-GAT	GGA N-GAT domain	0.0098	5	25.60	304	320
PPR_1	PPR repeat	7.7E-08	21	23.80	321	352
PPR_2	PPR repeat family	0.00025	10	30.00	330	373
PPR	PPR repeat	0.00024	10	25.00	332	356
PPR_2	PPR repeat family	0.0057	6	30.00	365	389
PPR	PPR repeat	2.7E-05	13	25.00	366	391
PPR_1	PPR repeat	0.00062	9	23.80	367	385