c2pfam

AT1G62390.1 :

Domain Description Evalue Bits GA Start End
TPR_2 Tetratricopeptide repeat 0.0035 7 22.40 55 83
TPR_1 Tetratricopeptide repeat 0.0058 6 20.40 58 83
TPR_11 TPR repeat 0.0052 6 26.80 58 83
TPR_16 Tetratricopeptide repeat 0.12 3 32.70 59 99
TPR_19 Tetratricopeptide repeat 0.13 2 25.00 62 102
TPR_14 Tetratricopeptide repeat 0.51 1 23.50 62 84
TPR_1 Tetratricopeptide repeat 0.17 1 20.40 91 103
Asp-B-Hydro_N Aspartyl beta-hydroxylase N-terminal region 0.048 3 21.00 105 160
TPR_19 Tetratricopeptide repeat 0.00082 9 25.00 106 158
TPR_16 Tetratricopeptide repeat 3.3E-05 14 32.70 117 157
TPR_1 Tetratricopeptide repeat 0.0061 6 20.40 126 147
TPR_14 Tetratricopeptide repeat 0.022 5 23.50 126 146
TPR_2 Tetratricopeptide repeat 0.058 3 22.40 126 157
TPR_8 Tetratricopeptide repeat 0.16 2 25.70 126 157
PB1 PB1 domain 2.6E-26 81 20.80 290 381
Asp-B-Hydro_N Aspartyl beta-hydroxylase N-terminal region 0.0042 6 21.00 380 448
TPR_14 Tetratricopeptide repeat 0.01 6 23.50 548 579
TPR_16 Tetratricopeptide repeat 0.031 4 32.70 548 579
TPR_8 Tetratricopeptide repeat 0.0017 8 25.70 550 569
TPR_11 TPR repeat 1E-05 15 26.80 551 581
TPR_1 Tetratricopeptide repeat 0.001 8 20.40 551 570
TPR_2 Tetratricopeptide repeat 0.0009 9 22.40 551 569
TPR_19 Tetratricopeptide repeat 0.0036 7 25.00 552 583
TPR_2 Tetratricopeptide repeat 0.18 2 22.40 570 593
Asp-B-Hydro_N Aspartyl beta-hydroxylase N-terminal region 0.0072 6 21.00 618 674

751

TPR_2
TPR_1
TPR_11
TPR_16
TPR_19
TPR_14
TPR_1
Asp-B-Hydro_N
TPR_19
TPR_16
TPR_1
TPR_14
TPR_2
TPR_8
PB1
Asp-B-Hydro_N
TPR_14
TPR_16
TPR_8
TPR_11
TPR_1
TPR_2
TPR_19
TPR_2
Asp-B-Hydro_N

References:

PB1
8931154 Novel domains in NADPH oxidase subunits, sorting nexins, and PtdIns 3-kinases: binding partners of SH3 domains? Protein Sci 1996;5:2353-2357.
7759517 Components of a new human protein kinase signal transduction pathway. J Biol Chem 1995;270:12665-12669.
7499418 Isolation of MEK5 and differential expression of alternatively spliced forms. J Biol Chem 1995;270:28897-28902.

TPR_19

Asp-B-Hydro_N
11735129 Molecular cloning and characterization of mouse cardiac junctate isoforms. Biochem Biophys Res Commun 2001;289:882-887.
11773073 Absence of post-translational aspartyl beta-hydroxylation of epidermal growth factor domains in mice leads to developmental defects and an increased incidence of intestinal neoplasia. J Biol Chem 2002;277:12970-12977.

TPR_14

TPR_16

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_11

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
TPR_2	Tetratricopeptide repeat	0.0035	7	22.40	55	83
TPR_1	Tetratricopeptide repeat	0.0058	6	20.40	58	83
TPR_11	TPR repeat	0.0052	6	26.80	58	83
TPR_16	Tetratricopeptide repeat	0.12	3	32.70	59	99
TPR_19	Tetratricopeptide repeat	0.13	2	25.00	62	102
TPR_14	Tetratricopeptide repeat	0.51	1	23.50	62	84
TPR_1	Tetratricopeptide repeat	0.17	1	20.40	91	103
Asp-B-Hydro_N	Aspartyl beta-hydroxylase N-terminal region	0.048	3	21.00	105	160
TPR_19	Tetratricopeptide repeat	0.00082	9	25.00	106	158
TPR_16	Tetratricopeptide repeat	3.3E-05	14	32.70	117	157
TPR_1	Tetratricopeptide repeat	0.0061	6	20.40	126	147
TPR_14	Tetratricopeptide repeat	0.022	5	23.50	126	146
TPR_2	Tetratricopeptide repeat	0.058	3	22.40	126	157
TPR_8	Tetratricopeptide repeat	0.16	2	25.70	126	157
PB1	PB1 domain	2.6E-26	81	20.80	290	381
Asp-B-Hydro_N	Aspartyl beta-hydroxylase N-terminal region	0.0042	6	21.00	380	448
TPR_14	Tetratricopeptide repeat	0.01	6	23.50	548	579
TPR_16	Tetratricopeptide repeat	0.031	4	32.70	548	579
TPR_8	Tetratricopeptide repeat	0.0017	8	25.70	550	569
TPR_11	TPR repeat	1E-05	15	26.80	551	581
TPR_1	Tetratricopeptide repeat	0.001	8	20.40	551	570
TPR_2	Tetratricopeptide repeat	0.0009	9	22.40	551	569
TPR_19	Tetratricopeptide repeat	0.0036	7	25.00	552	583
TPR_2	Tetratricopeptide repeat	0.18	2	22.40	570	593
Asp-B-Hydro_N	Aspartyl beta-hydroxylase N-terminal region	0.0072	6	21.00	618	674