c2pfam

AT1G63360.1 :

Domain Description Evalue Bits GA Start End
CENP-Q CENP-Q, a CENPA-CAD centromere complex subunit 0.00045 10 28.50 25 60
DegS Sensor protein DegS 0.0002 10 24.20 27 59
DivIC Septum formation initiator 0.0003 10 24.00 27 57
Nup54 Nucleoporin complex subunit 54 0.21 1 30.50 32 68
NB-ARC NB-ARC domain 0 233 23.50 157 398
AAA_16 AAA ATPase domain 1.5E-05 15 32.60 173 217
AAA_7 P-loop containing dynein motor region 0.00038 9 25.80 177 263
CbiA CobQ/CobB/MinD/ParA nucleotide binding domain 0.00035 10 21.70 178 198
LRR_8 Leucine rich repeat 0.16 1 27.00 512 544
LRR_8 Leucine rich repeat 1.4E-09 27 27.00 554 601
LRR_4 Leucine Rich repeats (2 copies) 0.00042 10 27.00 555 579
LRR_4 Leucine Rich repeats (2 copies) 0.00023 11 27.00 568 608
LRR_8 Leucine rich repeat 0.00061 9 27.00 607 650
LRR_4 Leucine Rich repeats (2 copies) 0.00033 11 27.00 616 656
Nup54 Nucleoporin complex subunit 54 0.0004 10 30.50 645 718
LRR_8 Leucine rich repeat 0.28 1 27.00 687 719
LRR_4 Leucine Rich repeats (2 copies) 0.23 2 27.00 716 757
LRR_4 Leucine Rich repeats (2 copies) 0.58 0 27.00 822 836

884

CENP-Q
DegS
DivIC
Nup54
NB-ARC
AAA_16
AAA_7
CbiA
LRR_8
LRR_8
LRR_4
LRR_4
LRR_8
LRR_4
Nup54
LRR_8
LRR_4
LRR_4

References:

Nup54

DivIC
8113187 Characterization of a cell division gene from Bacillus subtilis that is required for vegetative and sporulation septum formation. J Bacteriol 1994;176:1451-1459.

LRR_4

DegS
12471443 Bacillus subtilis functional genomics: genome-wide analysis of the DegS-DegU regulon by transcriptomics and proteomics. Mol Genet Genomics 2002;268:455-467.

LRR_8

CENP-Q

CbiA
9742225 Cobalamin (vitamin B12) biosynthesis: identification and characterization of a Bacillus megaterium cobI operon. Biochem J 1998;335:159-166.
9742226 Cobalamin (vitamin B12) biosynthesis: functional characterization of the Bacillus megaterium cbi genes required to convert uroporphyrinogen III into cobyrinic acid a,c-diamide. Biochem J 1998;335:167-173.
7635831 Identification and sequence analysis of genes involved in late steps in cobalamin (vitamin B12) synthesis in Rhodobacter capsulatus. J Bacteriol 1995;177:4481-4487.
8501034 Characterization of the cobalamin (vitamin B12) biosynthetic genes of Salmonella typhimurium. J Bacteriol 1993;175:3303-3316.
10966576 The synthetase domains of cobalamin biosynthesis amidotransferases cobB and cobQ belong to a new family of ATP-dependent amidoligases, related to dethiobiotin synthetase. Proteins 2000;41:238-247.
2149583 A family of ATPases involved in active partitioning of diverse bacterial plasmids. Mol Microbiol 1990;4:1455-1463.

NB-ARC
9545207 The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals. Curr Biol 1998;8:226-227.

AAA_7

AAA_16

Domain	Description	Evalue	Bits	GA	Start	End
CENP-Q	CENP-Q, a CENPA-CAD centromere complex subunit	0.00045	10	28.50	25	60
DegS	Sensor protein DegS	0.0002	10	24.20	27	59
DivIC	Septum formation initiator	0.0003	10	24.00	27	57
Nup54	Nucleoporin complex subunit 54	0.21	1	30.50	32	68
NB-ARC	NB-ARC domain	0	233	23.50	157	398
AAA_16	AAA ATPase domain	1.5E-05	15	32.60	173	217
AAA_7	P-loop containing dynein motor region	0.00038	9	25.80	177	263
CbiA	CobQ/CobB/MinD/ParA nucleotide binding domain	0.00035	10	21.70	178	198
LRR_8	Leucine rich repeat	0.16	1	27.00	512	544
LRR_8	Leucine rich repeat	1.4E-09	27	27.00	554	601
LRR_4	Leucine Rich repeats (2 copies)	0.00042	10	27.00	555	579
LRR_4	Leucine Rich repeats (2 copies)	0.00023	11	27.00	568	608
LRR_8	Leucine rich repeat	0.00061	9	27.00	607	650
LRR_4	Leucine Rich repeats (2 copies)	0.00033	11	27.00	616	656
Nup54	Nucleoporin complex subunit 54	0.0004	10	30.50	645	718
LRR_8	Leucine rich repeat	0.28	1	27.00	687	719
LRR_4	Leucine Rich repeats (2 copies)	0.23	2	27.00	716	757
LRR_4	Leucine Rich repeats (2 copies)	0.58	0	27.00	822	836