c2pfam

AT1G64310.1 :

Domain Description Evalue Bits GA Start End
PPR PPR repeat 0.26 1 25.00 49 65
PPR_2 PPR repeat family 1.7E-10 30 30.00 70 116
PPR_1 PPR repeat 0.1 1 23.80 70 84
PPR_3 Pentatricopeptide repeat domain 0.083 2 25.00 70 110
PPR PPR repeat 2.7E-06 16 25.00 73 100
PPR_long Pentacotripeptide-repeat region of PRORP 0.15 0 27.00 76 119
PPR_1 PPR repeat 0.1 1 23.80 104 115
PPR_1 PPR repeat 0.0035 6 23.80 146 164
PPR PPR repeat 8.1E-05 12 25.00 146 166
PPR_2 PPR repeat family 0.03 3 30.00 146 165
PPR_2 PPR repeat family 3.4E-10 29 30.00 170 217
PPR_1 PPR repeat 0.00039 9 23.80 170 198
PPR PPR repeat 5.2E-09 25 25.00 175 202
PPR_3 Pentatricopeptide repeat domain 0.28 0 25.00 194 213
PPR_1 PPR repeat 0.69 -2 23.80 201 209
PPR PPR repeat 0.065 2 25.00 247 268
PPR_1 PPR repeat 4.9E-05 12 23.80 270 298
PPR_3 Pentatricopeptide repeat domain 2.3E-06 16 25.00 270 318
PPR_2 PPR repeat family 9.8E-09 24 30.00 271 317
PPR_long Pentacotripeptide-repeat region of PRORP 0.17 -1 27.00 273 357
PPR PPR repeat 1.3E-08 23 25.00 274 303
PPR_3 Pentatricopeptide repeat domain 5.5E-05 12 25.00 336 381
PPR_2 PPR repeat family 0.0033 6 30.00 342 366
PPR PPR repeat 6.6E-06 15 25.00 346 373
PPR_1 PPR repeat 0.00067 8 23.80 347 366
PPR_3 Pentatricopeptide repeat domain 4.4E-05 12 25.00 372 419
PPR_2 PPR repeat family 1.5E-10 30 30.00 372 421
PPR_1 PPR repeat 0.00053 8 23.80 373 399
PPR PPR repeat 2.7E-05 13 25.00 375 405
PPR_long Pentacotripeptide-repeat region of PRORP 2.9E-06 15 27.00 391 473
PPR_3 Pentatricopeptide repeat domain 4E-06 15 25.00 402 456
PPR_1 PPR repeat 7.8E-09 24 23.80 403 436
PPR PPR repeat 4.7E-07 19 25.00 410 437
PPR_2 PPR repeat family 0.0005 9 30.00 414 446
PPR PPR repeat 0.004 6 25.00 448 469
PPR_2 PPR repeat family 0.051 2 30.00 451 473
PPR_1 PPR repeat 0.0069 5 23.80 451 468
PPR_3 Pentatricopeptide repeat domain 0.064 2 25.00 482 507
PPR PPR repeat 0.011 5 25.00 520 535

552

PPR
PPR_2
PPR_1
PPR_3
PPR
PPR_long
PPR_1
PPR_1
PPR
PPR_2
PPR_2
PPR_1
PPR
PPR_3
PPR_1
PPR
PPR_1
PPR_3
PPR_2
PPR_long
PPR
PPR_3
PPR_2
PPR
PPR_1
PPR_3
PPR_2
PPR_1
PPR
PPR_long
PPR_3
PPR_1
PPR
PPR_2
PPR
PPR_2
PPR_1
PPR_3
PPR

References:

PPR_long

PPR_3

PPR_2

PPR_1

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

Domain	Description	Evalue	Bits	GA	Start	End
PPR	PPR repeat	0.26	1	25.00	49	65
PPR_2	PPR repeat family	1.7E-10	30	30.00	70	116
PPR_1	PPR repeat	0.1	1	23.80	70	84
PPR_3	Pentatricopeptide repeat domain	0.083	2	25.00	70	110
PPR	PPR repeat	2.7E-06	16	25.00	73	100
PPR_long	Pentacotripeptide-repeat region of PRORP	0.15	0	27.00	76	119
PPR_1	PPR repeat	0.1	1	23.80	104	115
PPR_1	PPR repeat	0.0035	6	23.80	146	164
PPR	PPR repeat	8.1E-05	12	25.00	146	166
PPR_2	PPR repeat family	0.03	3	30.00	146	165
PPR_2	PPR repeat family	3.4E-10	29	30.00	170	217
PPR_1	PPR repeat	0.00039	9	23.80	170	198
PPR	PPR repeat	5.2E-09	25	25.00	175	202
PPR_3	Pentatricopeptide repeat domain	0.28	0	25.00	194	213
PPR_1	PPR repeat	0.69	-2	23.80	201	209
PPR	PPR repeat	0.065	2	25.00	247	268
PPR_1	PPR repeat	4.9E-05	12	23.80	270	298
PPR_3	Pentatricopeptide repeat domain	2.3E-06	16	25.00	270	318
PPR_2	PPR repeat family	9.8E-09	24	30.00	271	317
PPR_long	Pentacotripeptide-repeat region of PRORP	0.17	-1	27.00	273	357
PPR	PPR repeat	1.3E-08	23	25.00	274	303
PPR_3	Pentatricopeptide repeat domain	5.5E-05	12	25.00	336	381
PPR_2	PPR repeat family	0.0033	6	30.00	342	366
PPR	PPR repeat	6.6E-06	15	25.00	346	373
PPR_1	PPR repeat	0.00067	8	23.80	347	366
PPR_3	Pentatricopeptide repeat domain	4.4E-05	12	25.00	372	419
PPR_2	PPR repeat family	1.5E-10	30	30.00	372	421
PPR_1	PPR repeat	0.00053	8	23.80	373	399
PPR	PPR repeat	2.7E-05	13	25.00	375	405
PPR_long	Pentacotripeptide-repeat region of PRORP	2.9E-06	15	27.00	391	473
PPR_3	Pentatricopeptide repeat domain	4E-06	15	25.00	402	456
PPR_1	PPR repeat	7.8E-09	24	23.80	403	436
PPR	PPR repeat	4.7E-07	19	25.00	410	437
PPR_2	PPR repeat family	0.0005	9	30.00	414	446
PPR	PPR repeat	0.004	6	25.00	448	469
PPR_2	PPR repeat family	0.051	2	30.00	451	473
PPR_1	PPR repeat	0.0069	5	23.80	451	468
PPR_3	Pentatricopeptide repeat domain	0.064	2	25.00	482	507
PPR	PPR repeat	0.011	5	25.00	520	535