c2pfam

AT1G64320.1 :

Domain Description Evalue Bits GA Start End
DUF1664 Protein of unknown function (DUF1664) 0.3 1 30.00 2 47
AAA_13 AAA domain 7.6E-05 12 36.00 4 196
TPR_MLP1_2 TPR/MLP1/MLP2-like protein 0.65 0 30.00 11 58
Fib_alpha Fibrinogen alpha/beta chain family 0.0036 8 26.20 17 110
ATG16 Autophagy protein 16 (ATG16) 1.3E-05 16 35.00 19 192
Leu_zip Leucine zipper 0.0022 8 28.20 72 136
Synaptobrevin Synaptobrevin 0.0031 8 25.00 79 113
Spc7 Spc7 kinetochore protein 0.21 0 34.00 83 149
Tup_N Tup N-terminal 0.98 0 22.40 85 119
FUSC Fusaric acid resistance protein family 0.23 0 30.90 94 139
DUF4407 Domain of unknown function (DUF4407) 0.00017 11 31.30 94 220
ADIP Afadin- and alpha -actinin-Binding 0.0087 6 29.10 95 135
TPR_MLP1_2 TPR/MLP1/MLP2-like protein 0.0047 7 30.00 96 167
Crescentin Crescentin protein 0.008 5 100.00 97 135
DUF1664 Protein of unknown function (DUF1664) 0.0055 7 30.00 99 175
DUF3618 Protein of unknown function (DUF3618) 0.058 4 21.70 104 128
Fib_alpha Fibrinogen alpha/beta chain family 0.0014 9 26.20 113 214
Crescentin Crescentin protein 0.051 3 100.00 140 182
ADIP Afadin- and alpha -actinin-Binding 0.069 3 29.10 142 187
Leu_zip Leucine zipper 1.9E-05 14 28.20 150 277
CoV_S2 Coronavirus spike glycoprotein S2 0.002 7 40.00 161 213
Spc7 Spc7 kinetochore protein 4.3E-07 19 34.00 167 310
DUF1664 Protein of unknown function (DUF1664) 0.22 2 30.00 171 213
ADIP Afadin- and alpha -actinin-Binding 0.0013 9 29.10 191 273
ATG16 Autophagy protein 16 (ATG16) 0.099 3 35.00 196 272
TPR_MLP1_2 TPR/MLP1/MLP2-like protein 9.7E-06 16 30.00 199 313
AAA_13 AAA domain 0.003 6 36.00 207 381
Fib_alpha Fibrinogen alpha/beta chain family 0.22 2 26.20 223 326
Crescentin Crescentin protein 0.048 3 100.00 235 393
DUF4407 Domain of unknown function (DUF4407) 0.021 4 31.30 236 371
DUF1664 Protein of unknown function (DUF1664) 2.3E-06 18 30.00 239 322
ATG16 Autophagy protein 16 (ATG16) 0.41 1 35.00 243 306
Tup_N Tup N-terminal 6.5E-06 17 22.40 246 304
CoV_S2 Coronavirus spike glycoprotein S2 0.0014 8 40.00 246 324
ADIP Afadin- and alpha -actinin-Binding 0.083 3 29.10 249 330
Synaptobrevin Synaptobrevin 0.41 1 25.00 250 289
FUSC Fusaric acid resistance protein family 0.0021 7 30.90 251 314
Leu_zip Leucine zipper 0.013 5 28.20 275 412
Fib_alpha Fibrinogen alpha/beta chain family 0.051 4 26.20 280 378
DUF3618 Protein of unknown function (DUF3618) 0.0035 8 21.70 283 302
DUF4577 Domain of unknown function (DUF4577) 0.028 5 27.00 296 318
Tup_N Tup N-terminal 0.18 2 22.40 304 335
Spc7 Spc7 kinetochore protein 0.011 5 34.00 305 407
DUF4577 Domain of unknown function (DUF4577) 0.0084 6 27.00 325 359
ADIP Afadin- and alpha -actinin-Binding 0.017 5 29.10 325 386
ATG16 Autophagy protein 16 (ATG16) 0.098 3 35.00 326 379
Leu_zip Leucine zipper 0.53 0 28.20 403 477
AAA_13 AAA domain 0.29 0 36.00 405 588
Fib_alpha Fibrinogen alpha/beta chain family 0.14 3 26.20 414 513
Tup_N Tup N-terminal 0.24 2 22.40 440 477
Spc7 Spc7 kinetochore protein 0.0049 6 34.00 450 564
TPR_MLP1_2 TPR/MLP1/MLP2-like protein 0.086 3 30.00 451 498
DUF4407 Domain of unknown function (DUF4407) 0.0048 6 31.30 452 555
CoV_S2 Coronavirus spike glycoprotein S2 0.12 1 40.00 464 571
Leu_zip Leucine zipper 0.031 4 28.20 486 612
Crescentin Crescentin protein 0.013 5 100.00 487 584
ADIP Afadin- and alpha -actinin-Binding 0.0022 8 29.10 489 585
Fib_alpha Fibrinogen alpha/beta chain family 0.015 6 26.20 492 578
DUF1664 Protein of unknown function (DUF1664) 0.00017 12 30.00 493 575
TPR_MLP1_2 TPR/MLP1/MLP2-like protein 0.57 0 30.00 514 573

623

DUF1664
AAA_13
TPR_MLP1_2
Fib_alpha
ATG16
Leu_zip
Synaptobrevin
Spc7
Tup_N
FUSC
DUF4407
ADIP
TPR_MLP1_2
Crescentin
DUF1664
DUF3618
Fib_alpha
Crescentin
ADIP
Leu_zip
CoV_S2
Spc7
DUF1664
ADIP
ATG16
TPR_MLP1_2
AAA_13
Fib_alpha
Crescentin
DUF4407
DUF1664
ATG16
Tup_N
CoV_S2
ADIP
Synaptobrevin
FUSC
Leu_zip
Fib_alpha
DUF3618
DUF4577
Tup_N
Spc7
DUF4577
ADIP
ATG16
Leu_zip
AAA_13
Fib_alpha
Tup_N
Spc7
TPR_MLP1_2
DUF4407
CoV_S2
Leu_zip
Crescentin
ADIP
Fib_alpha
DUF1664
TPR_MLP1_2

References:

DUF4407

TPR_MLP1_2
9024684 Identification of protein p270/Tpr as a constitutive component of the nuclear pore complex-attached intranuclear filaments. J Cell Biol 1997;136:515-529.
7798308 Tpr, a large coiled coil protein whose amino terminus is involved in activation of oncogenic kinases, is localized to the cytoplasmic surface of the nuclear pore complex. J Cell Biol 1994;127:1515-1526.
10617624 Mlp2p, a component of nuclear pore attached intranuclear filaments, associates with nic96p. J Biol Chem 2000;275:343-350.
12490156 Myosin-like proteins 1 and 2 are not required for silencing or telomere anchoring, but act in the Tel1 pathway of telomere length control. J Struct Biol 2002;140:79-91.

DUF1664

ADIP
12446711 ADIP, a novel Afadin- and alpha-actinin-binding protein localized at cell-cell adherens junctions. J Biol Chem. 2003;278:4103-4111.
17486116 Gamma-tubulin complex-mediated anchoring of spindle microtubules to spindle-pole bodies requires Msd1 in fission yeast. Nat Cell Biol. 2007;9:646-653.

AAA_13

CoV_S2

Fib_alpha
11601975 Crystal structure of native chicken fibrinogen at 2.7 A resolution. Biochemistry. 2001;40:12515-12523.

Leu_zip

Synaptobrevin

Crescentin

FUSC
1370369 Molecular cloning and characterization of the fusaric acid-resistance gene from Pseudomonas cepacia. Agric Biol Chem 1991;55:1913-1918.

ATG16
10406794 Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway. EMBO J. 1999;18:3888-3896.
17012802 Expression, purification and crystallization of the Atg5-Atg16 complex essential for autophagy. Acta Crystallograph Sect F Struct Biol Cryst Commun. 2006;62:1021-1023.

Tup_N
12234489 Mutations of the WD repeats that compromise Tup1 repression function maintain structural integrity of the WD domain trypsin-resistant core. Arch Biochem Biophys. 2002;406:47-54.

DUF4577

DUF3618

Spc7
15371542 The fission yeast kinetochore component Spc7 associates with the EB1 family member Mal3 and is required for kinetochore-spindle association. Mol Biol Cell 2004;15:5255-5267.

Domain	Description	Evalue	Bits	GA	Start	End
DUF1664	Protein of unknown function (DUF1664)	0.3	1	30.00	2	47
AAA_13	AAA domain	7.6E-05	12	36.00	4	196
TPR_MLP1_2	TPR/MLP1/MLP2-like protein	0.65	0	30.00	11	58
Fib_alpha	Fibrinogen alpha/beta chain family	0.0036	8	26.20	17	110
ATG16	Autophagy protein 16 (ATG16)	1.3E-05	16	35.00	19	192
Leu_zip	Leucine zipper	0.0022	8	28.20	72	136
Synaptobrevin	Synaptobrevin	0.0031	8	25.00	79	113
Spc7	Spc7 kinetochore protein	0.21	0	34.00	83	149
Tup_N	Tup N-terminal	0.98	0	22.40	85	119
FUSC	Fusaric acid resistance protein family	0.23	0	30.90	94	139
DUF4407	Domain of unknown function (DUF4407)	0.00017	11	31.30	94	220
ADIP	Afadin- and alpha -actinin-Binding	0.0087	6	29.10	95	135
TPR_MLP1_2	TPR/MLP1/MLP2-like protein	0.0047	7	30.00	96	167
Crescentin	Crescentin protein	0.008	5	100.00	97	135
DUF1664	Protein of unknown function (DUF1664)	0.0055	7	30.00	99	175
DUF3618	Protein of unknown function (DUF3618)	0.058	4	21.70	104	128
Fib_alpha	Fibrinogen alpha/beta chain family	0.0014	9	26.20	113	214
Crescentin	Crescentin protein	0.051	3	100.00	140	182
ADIP	Afadin- and alpha -actinin-Binding	0.069	3	29.10	142	187
Leu_zip	Leucine zipper	1.9E-05	14	28.20	150	277
CoV_S2	Coronavirus spike glycoprotein S2	0.002	7	40.00	161	213
Spc7	Spc7 kinetochore protein	4.3E-07	19	34.00	167	310
DUF1664	Protein of unknown function (DUF1664)	0.22	2	30.00	171	213
ADIP	Afadin- and alpha -actinin-Binding	0.0013	9	29.10	191	273
ATG16	Autophagy protein 16 (ATG16)	0.099	3	35.00	196	272
TPR_MLP1_2	TPR/MLP1/MLP2-like protein	9.7E-06	16	30.00	199	313
AAA_13	AAA domain	0.003	6	36.00	207	381
Fib_alpha	Fibrinogen alpha/beta chain family	0.22	2	26.20	223	326
Crescentin	Crescentin protein	0.048	3	100.00	235	393
DUF4407	Domain of unknown function (DUF4407)	0.021	4	31.30	236	371
DUF1664	Protein of unknown function (DUF1664)	2.3E-06	18	30.00	239	322
ATG16	Autophagy protein 16 (ATG16)	0.41	1	35.00	243	306
Tup_N	Tup N-terminal	6.5E-06	17	22.40	246	304
CoV_S2	Coronavirus spike glycoprotein S2	0.0014	8	40.00	246	324
ADIP	Afadin- and alpha -actinin-Binding	0.083	3	29.10	249	330
Synaptobrevin	Synaptobrevin	0.41	1	25.00	250	289
FUSC	Fusaric acid resistance protein family	0.0021	7	30.90	251	314
Leu_zip	Leucine zipper	0.013	5	28.20	275	412
Fib_alpha	Fibrinogen alpha/beta chain family	0.051	4	26.20	280	378
DUF3618	Protein of unknown function (DUF3618)	0.0035	8	21.70	283	302
DUF4577	Domain of unknown function (DUF4577)	0.028	5	27.00	296	318
Tup_N	Tup N-terminal	0.18	2	22.40	304	335
Spc7	Spc7 kinetochore protein	0.011	5	34.00	305	407
DUF4577	Domain of unknown function (DUF4577)	0.0084	6	27.00	325	359
ADIP	Afadin- and alpha -actinin-Binding	0.017	5	29.10	325	386
ATG16	Autophagy protein 16 (ATG16)	0.098	3	35.00	326	379
Leu_zip	Leucine zipper	0.53	0	28.20	403	477
AAA_13	AAA domain	0.29	0	36.00	405	588
Fib_alpha	Fibrinogen alpha/beta chain family	0.14	3	26.20	414	513
Tup_N	Tup N-terminal	0.24	2	22.40	440	477
Spc7	Spc7 kinetochore protein	0.0049	6	34.00	450	564
TPR_MLP1_2	TPR/MLP1/MLP2-like protein	0.086	3	30.00	451	498
DUF4407	Domain of unknown function (DUF4407)	0.0048	6	31.30	452	555
CoV_S2	Coronavirus spike glycoprotein S2	0.12	1	40.00	464	571
Leu_zip	Leucine zipper	0.031	4	28.20	486	612
Crescentin	Crescentin protein	0.013	5	100.00	487	584
ADIP	Afadin- and alpha -actinin-Binding	0.0022	8	29.10	489	585
Fib_alpha	Fibrinogen alpha/beta chain family	0.015	6	26.20	492	578
DUF1664	Protein of unknown function (DUF1664)	0.00017	12	30.00	493	575
TPR_MLP1_2	TPR/MLP1/MLP2-like protein	0.57	0	30.00	514	573