c2pfam

AT1G65430.1 :

Domain Description Evalue Bits GA Start End
zf-RING_2 Ring finger domain 2.8E-06 17 27.30 127 174
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.7E-06 17 21.00 128 160
zf-RING_UBOX RING-type zinc-finger 2.8E-05 13 25.20 128 155
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 8.3E-08 21 27.00 128 159
zf-RING_5 zinc-RING finger domain 1.2E-06 18 27.90 128 156
IBR IBR domain 0.81 -1 23.60 138 154
IBR IBR domain 0.074 2 23.60 171 184
IBR IBR domain 2E-16 49 23.60 197 259
zf-FPG_IleRS Zinc finger found in FPG and IleRS 0.068 2 20.80 205 218
zf-RING_UBOX RING-type zinc-finger 0.022 4 25.20 241 251
IBR IBR domain 1.5E-12 37 23.60 276 324
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 0.058 2 21.00 277 289
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 0.18 1 27.00 280 289
zf-FPG_IleRS Zinc finger found in FPG and IleRS 0.00049 9 20.80 284 295
zf-RING_UBOX RING-type zinc-finger 0.16 1 25.20 286 323
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 0.51 -1 21.00 286 323
zf-RING_2 Ring finger domain 0.06 3 27.30 286 325
zf-RING_5 zinc-RING finger domain 0.071 2 27.90 286 318
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 0.21 1 27.00 305 323
zf-RING_5 zinc-RING finger domain 0.23 1 27.90 543 564
zf-FPG_IleRS Zinc finger found in FPG and IleRS 0.019 4 20.80 552 565

567

zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
IBR
IBR
IBR
zf-FPG_IleRS
zf-RING_UBOX
IBR
zf-C3HC4
zf-C3HC4_2
zf-FPG_IleRS
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-RING_5
zf-FPG_IleRS

References:

zf-FPG_IleRS

zf-C3HC4_2

zf-RING_UBOX

IBR
10366851 A novel transactivation domain in parkin. Trends Biochem Sci 1999;24:229-231.
10422847 TRIADs: a new class of proteins with a novel cysteine-rich signature. Protein Sci 1999;8:1557-1561.
15152079 Parkin and relatives: the RBR family of ubiquitin ligases. Physiol Genomics 2004;17:253-263.
12446796 Comparative genomics of the RBR family, including the Parkinson's disease-related gene parkin and the genes of the ariadne subfamily. Mol Biol Evol 2002;19:2039-2050.

zf-RING_5

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-RING_2

Domain	Description	Evalue	Bits	GA	Start	End
zf-RING_2	Ring finger domain	2.8E-06	17	27.30	127	174
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	1.7E-06	17	21.00	128	160
zf-RING_UBOX	RING-type zinc-finger	2.8E-05	13	25.20	128	155
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	8.3E-08	21	27.00	128	159
zf-RING_5	zinc-RING finger domain	1.2E-06	18	27.90	128	156
IBR	IBR domain	0.81	-1	23.60	138	154
IBR	IBR domain	0.074	2	23.60	171	184
IBR	IBR domain	2E-16	49	23.60	197	259
zf-FPG_IleRS	Zinc finger found in FPG and IleRS	0.068	2	20.80	205	218
zf-RING_UBOX	RING-type zinc-finger	0.022	4	25.20	241	251
IBR	IBR domain	1.5E-12	37	23.60	276	324
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	0.058	2	21.00	277	289
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	0.18	1	27.00	280	289
zf-FPG_IleRS	Zinc finger found in FPG and IleRS	0.00049	9	20.80	284	295
zf-RING_UBOX	RING-type zinc-finger	0.16	1	25.20	286	323
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	0.51	-1	21.00	286	323
zf-RING_2	Ring finger domain	0.06	3	27.30	286	325
zf-RING_5	zinc-RING finger domain	0.071	2	27.90	286	318
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	0.21	1	27.00	305	323
zf-RING_5	zinc-RING finger domain	0.23	1	27.90	543	564
zf-FPG_IleRS	Zinc finger found in FPG and IleRS	0.019	4	20.80	552	565