c2pfam

AT1G66150.1 :

Domain Description Evalue Bits GA Start End
DUF1201 Protein of unknown function (DUF1201) 0.81 0 20.90 5 19
LRRNT_2 Leucine rich repeat N-terminal domain 1.9E-09 28 20.70 26 60
LRR_8 Leucine rich repeat 0.011 5 27.00 64 100
LRR_4 Leucine Rich repeats (2 copies) 0.06 4 27.00 76 103
LRR_1 Leucine Rich Repeat 0.018 6 20.60 90 110
LRR_6 Leucine Rich repeat 0.018 5 23.40 90 102
LRR_8 Leucine rich repeat 6.1E-11 32 27.00 107 146
LRR_4 Leucine Rich repeats (2 copies) 1.9E-08 24 27.00 112 152
LRR_1 Leucine Rich Repeat 0.0023 9 20.60 112 134
LRR_1 Leucine Rich Repeat 0.52 1 20.60 136 156
LRR_4 Leucine Rich repeats (2 copies) 0.046 4 27.00 162 198
LRR_8 Leucine rich repeat 0.056 3 27.00 186 243
LRR_6 Leucine Rich repeat 0.25 2 23.40 188 201
LRR_4 Leucine Rich repeats (2 copies) 3.3E-06 17 27.00 211 250
LRR_8 Leucine rich repeat 1.8E-07 21 27.00 251 291
LRR_4 Leucine Rich repeats (2 copies) 2E-05 15 27.00 256 293
LRR_1 Leucine Rich Repeat 0.0086 7 20.60 257 278
LRR_6 Leucine Rich repeat 0.31 1 23.40 257 269
LRR_6 Leucine Rich repeat 0.083 3 23.40 280 293
LRR_1 Leucine Rich Repeat 0.013 6 20.60 280 299
LRRNT_2 Leucine rich repeat N-terminal domain 1.4E-08 25 20.70 326 360
LRR_8 Leucine rich repeat 9E-08 22 27.00 382 422
LRR_4 Leucine Rich repeats (2 copies) 4.2E-07 20 27.00 386 429
LRR_6 Leucine Rich repeat 0.0017 8 23.40 410 422
LRR_1 Leucine Rich Repeat 0.003 8 20.60 411 427
Adeno_E3_CR2 Adenovirus E3 region protein CR2 0.00011 12 25.00 478 510
Syndecan Syndecan domain 8.2E-05 12 31.40 479 508
DUF1201 Protein of unknown function (DUF1201) 0.0004 10 20.90 489 521
Pkinase Protein kinase domain 0 156 20.40 590 863
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 153 23.10 591 859
ABC1 ABC1 family 0.00014 12 20.60 592 622
APH Phosphotransferase enzyme family 0.43 0 22.40 629 668
APH Phosphotransferase enzyme family 3.1E-06 17 22.40 669 743

942

DUF1201
LRRNT_2
LRR_8
LRR_4
LRR_1
LRR_6
LRR_8
LRR_4
LRR_1
LRR_1
LRR_4
LRR_8
LRR_6
LRR_4
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_1
LRRNT_2
LRR_8
LRR_4
LRR_6
LRR_1
Adeno_E3_CR2
Syndecan
DUF1201
Pkinase
PK_Tyr_Ser-Thr
ABC1
APH
APH

References:

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

DUF1201

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Syndecan
9582338 Solution structure of a syndecan-4 cytoplasmic domain and its interaction with phosphatidylinositol 4,5-bisphosphate. J Biol Chem 1998;273:13022-13029.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_8

LRR_6

LRR_4

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

Adeno_E3_CR2
8627757 Early region 3 of adenovirus type 19 (subgroup D) encodes an HLA-binding protein distinct from that of subgroups B and C. J Virol 1996;70:2832-2841.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
DUF1201	Protein of unknown function (DUF1201)	0.81	0	20.90	5	19
LRRNT_2	Leucine rich repeat N-terminal domain	1.9E-09	28	20.70	26	60
LRR_8	Leucine rich repeat	0.011	5	27.00	64	100
LRR_4	Leucine Rich repeats (2 copies)	0.06	4	27.00	76	103
LRR_1	Leucine Rich Repeat	0.018	6	20.60	90	110
LRR_6	Leucine Rich repeat	0.018	5	23.40	90	102
LRR_8	Leucine rich repeat	6.1E-11	32	27.00	107	146
LRR_4	Leucine Rich repeats (2 copies)	1.9E-08	24	27.00	112	152
LRR_1	Leucine Rich Repeat	0.0023	9	20.60	112	134
LRR_1	Leucine Rich Repeat	0.52	1	20.60	136	156
LRR_4	Leucine Rich repeats (2 copies)	0.046	4	27.00	162	198
LRR_8	Leucine rich repeat	0.056	3	27.00	186	243
LRR_6	Leucine Rich repeat	0.25	2	23.40	188	201
LRR_4	Leucine Rich repeats (2 copies)	3.3E-06	17	27.00	211	250
LRR_8	Leucine rich repeat	1.8E-07	21	27.00	251	291
LRR_4	Leucine Rich repeats (2 copies)	2E-05	15	27.00	256	293
LRR_1	Leucine Rich Repeat	0.0086	7	20.60	257	278
LRR_6	Leucine Rich repeat	0.31	1	23.40	257	269
LRR_6	Leucine Rich repeat	0.083	3	23.40	280	293
LRR_1	Leucine Rich Repeat	0.013	6	20.60	280	299
LRRNT_2	Leucine rich repeat N-terminal domain	1.4E-08	25	20.70	326	360
LRR_8	Leucine rich repeat	9E-08	22	27.00	382	422
LRR_4	Leucine Rich repeats (2 copies)	4.2E-07	20	27.00	386	429
LRR_6	Leucine Rich repeat	0.0017	8	23.40	410	422
LRR_1	Leucine Rich Repeat	0.003	8	20.60	411	427
Adeno_E3_CR2	Adenovirus E3 region protein CR2	0.00011	12	25.00	478	510
Syndecan	Syndecan domain	8.2E-05	12	31.40	479	508
DUF1201	Protein of unknown function (DUF1201)	0.0004	10	20.90	489	521
Pkinase	Protein kinase domain	0	156	20.40	590	863
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	153	23.10	591	859
ABC1	ABC1 family	0.00014	12	20.60	592	622
APH	Phosphotransferase enzyme family	0.43	0	22.40	629	668
APH	Phosphotransferase enzyme family	3.1E-06	17	22.40	669	743