c2pfam

AT1G66880.1 :

Domain Description Evalue Bits GA Start End
GUB_WAK_bind Wall-associated receptor kinase galacturonan-binding 6E-16 48 29.40 24 83
WAK_assoc Wall-associated receptor kinase C-terminal 4.1E-13 40 27.00 143 208
VirK VirK protein 0.0086 6 20.50 171 195
GUB_WAK_bind Wall-associated receptor kinase galacturonan-binding 1.6E-08 25 29.40 231 275
WAK_assoc Wall-associated receptor kinase C-terminal 1.2E-09 28 27.00 338 399
VirK VirK protein 0.069 3 20.50 362 386
GUB_WAK_bind Wall-associated receptor kinase galacturonan-binding 0.37 1 29.40 391 414
GUB_WAK_bind Wall-associated receptor kinase galacturonan-binding 4.2E-14 42 29.40 417 475
WAK_assoc Wall-associated receptor kinase C-terminal 1.5E-14 44 27.00 517 605
VirK VirK protein 0.0016 8 20.50 563 589
GUB_WAK_bind Wall-associated receptor kinase galacturonan-binding 1.1E-10 32 29.40 631 693
WAK_assoc Wall-associated receptor kinase C-terminal 9.5E-23 71 27.00 761 847
VirK VirK protein 0.031 4 20.50 803 840
TMEM51 Transmembrane protein 51 0.0002 11 25.50 872 967
EphA2_TM Ephrin type-A receptor 2 transmembrane domain 0.00034 11 28.90 875 973
ABC1 ABC1 family 9.8E-05 12 20.60 969 1006
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 166 23.10 969 1239
Pkinase Protein kinase domain 0 161 20.40 970 1237
APH Phosphotransferase enzyme family 0.041 3 22.40 987 1055
Kinase-like Kinase-like 4.7E-06 16 25.00 1047 1111
Pkinase_fungal Fungal protein kinase 0.00017 10 24.10 1078 1103
APH Phosphotransferase enzyme family 0.00051 9 22.40 1085 1116

1296

GUB_WAK_bind
WAK_assoc
VirK
GUB_WAK_bind
WAK_assoc
VirK
GUB_WAK_bind
GUB_WAK_bind
WAK_assoc
VirK
GUB_WAK_bind
WAK_assoc
VirK
TMEM51
EphA2_TM
ABC1
PK_Tyr_Ser-Thr
Pkinase
APH
Kinase-like
Pkinase_fungal
APH

References:

VirK
11434457 Sequence characterization of the vir region of a nopaline type Ti plasmid, pTi-SAKURA. Genes Genet Syst 2001;76:121-130.

WAK_assoc

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

TMEM51

Kinase-like

GUB_WAK_bind

EphA2_TM

PK_Tyr_Ser-Thr

Pkinase_fungal

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

Domain	Description	Evalue	Bits	GA	Start	End
GUB_WAK_bind	Wall-associated receptor kinase galacturonan-binding	6E-16	48	29.40	24	83
WAK_assoc	Wall-associated receptor kinase C-terminal	4.1E-13	40	27.00	143	208
VirK	VirK protein	0.0086	6	20.50	171	195
GUB_WAK_bind	Wall-associated receptor kinase galacturonan-binding	1.6E-08	25	29.40	231	275
WAK_assoc	Wall-associated receptor kinase C-terminal	1.2E-09	28	27.00	338	399
VirK	VirK protein	0.069	3	20.50	362	386
GUB_WAK_bind	Wall-associated receptor kinase galacturonan-binding	0.37	1	29.40	391	414
GUB_WAK_bind	Wall-associated receptor kinase galacturonan-binding	4.2E-14	42	29.40	417	475
WAK_assoc	Wall-associated receptor kinase C-terminal	1.5E-14	44	27.00	517	605
VirK	VirK protein	0.0016	8	20.50	563	589
GUB_WAK_bind	Wall-associated receptor kinase galacturonan-binding	1.1E-10	32	29.40	631	693
WAK_assoc	Wall-associated receptor kinase C-terminal	9.5E-23	71	27.00	761	847
VirK	VirK protein	0.031	4	20.50	803	840
TMEM51	Transmembrane protein 51	0.0002	11	25.50	872	967
EphA2_TM	Ephrin type-A receptor 2 transmembrane domain	0.00034	11	28.90	875	973
ABC1	ABC1 family	9.8E-05	12	20.60	969	1006
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	166	23.10	969	1239
Pkinase	Protein kinase domain	0	161	20.40	970	1237
APH	Phosphotransferase enzyme family	0.041	3	22.40	987	1055
Kinase-like	Kinase-like	4.7E-06	16	25.00	1047	1111
Pkinase_fungal	Fungal protein kinase	0.00017	10	24.10	1078	1103
APH	Phosphotransferase enzyme family	0.00051	9	22.40	1085	1116