c2pfam

AT1G67530.1 :

Domain Description Evalue Bits GA Start End
Integrase_Zn Integrase Zinc binding domain 2E-05 14 21.00 52 75
DUF2732 Protein of unknown function (DUF2732) 0.0032 7 25.00 180 209
U-box U-box domain 3.2E-22 68 21.40 273 342
zf-Nse Zinc-finger of the MIZ type in Nse subunit 3.5E-05 14 20.70 275 314
zf-C3HC4_4 zinc finger of C3HC4-type, RING 4.3E-05 13 30.00 278 314
zf-RING_UBOX RING-type zinc-finger 0.00011 12 25.20 278 314
REV1_C DNA repair protein REV1 C-terminal domain 0.0013 9 26.50 415 455
Arm Armadillo/beta-catenin-like repeat 0.34 1 20.60 457 478
KAP Kinesin-associated protein (KAP) 7.6E-07 17 19.40 462 665
Atx10homo_assoc Spinocerebellar ataxia type 10 protein domain 0.0015 8 22.40 463 508
Arm Armadillo/beta-catenin-like repeat 0.022 5 20.60 501 524
UNC45-central Myosin-binding striated muscle assembly central 0.003 7 24.50 505 573
Arm Armadillo/beta-catenin-like repeat 9.2E-05 12 20.60 542 580
DUF3361 Domain of unknown function (DUF3361) 0.00015 12 27.20 553 663
UNC45-central Myosin-binding striated muscle assembly central 0.0037 7 24.50 589 663
DUF2732 Protein of unknown function (DUF2732) 0.035 4 25.00 614 642
Atx10homo_assoc Spinocerebellar ataxia type 10 protein domain 0.22 1 22.40 628 669
Arm Armadillo/beta-catenin-like repeat 0.26 1 20.60 629 664
Arm Armadillo/beta-catenin-like repeat 0.0096 6 20.60 670 685

782

Integrase_Zn
DUF2732
U-box
zf-Nse
zf-C3HC4_4
zf-RING_UBOX
REV1_C
Arm
KAP
Atx10homo_assoc
Arm
UNC45-central
Arm
DUF3361
UNC45-central
DUF2732
Atx10homo_assoc
Arm
Arm

References:

DUF3361

Arm
9298899 Three-dimensional structure of the armadillo repeat region of beta-catenin. Cell 1997;90:871-882.
8573337 Signal transduction of beta-catenin. Curr Opin Cell Biol 1995;7:634-640.
9309175 Armadillo and dTCF: a marriage made in the nucleus. Curr Opin Genet Dev 1997;7:459-466.
8259519 Association of the APC tumor suppressor protein with catenins. Science 1993;262:1734-1737.
8259518 Association of the APC gene product with beta-catenin. Science 1993;262:1731-1734.
2261639 The segment polarity gene armadillo encodes a functionally modular protein that is the Drosophila homolog of human plakoglobin. Cell 1990;63:1167-1176.

Atx10homo_assoc
15201271 Ataxin-10, the spinocerebellar ataxia type 10 neurodegenerative disorder protein, is essential for survival of cerebellar neurons. J Biol Chem. 2004;279:35542-35550.

zf-RING_UBOX

U-box
10704423 The U box is a modified RING finger - a common domain in ubiquitination. Curr Biol 2000;10:132-134.

KAP
10819327 C. elegans KLP-11/OSM-3/KAP-1: orthologs of the sea urchin kinesin-II, and mouse KIF3A/KIFB/KAP3 kinesin complexes. DNA Res 2000;7:121-125.
11912492 Identification of a link between the tumour suppressor APC and the kinesin superfamily. Nat Cell Biol 2002;4:323-327.

REV1_C

Integrase_Zn
9228950 Solution structure of the N-terminal zinc binding domain of HIV-1 integrase. Nat Struct Biol 1997;4:567-577.

DUF2732

zf-C3HC4_4

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

UNC45-central
12356907 Two mammalian UNC-45 isoforms are related to distinct cytoskeletal and muscle-specific functions. J Cell Sci. 2002;115:4013-4023.
18523008 Yeast UCS proteins promote actomyosin interactions and limit myosin turnover in cells. Proc Natl Acad Sci U S A. 2008;105:8014-8019.
18478096 Unc45b forms a cytosolic complex with Hsp90 and targets the unfolded myosin motor domain. PLoS ONE. 2008;3:e2137.

Domain	Description	Evalue	Bits	GA	Start	End
Integrase_Zn	Integrase Zinc binding domain	2E-05	14	21.00	52	75
DUF2732	Protein of unknown function (DUF2732)	0.0032	7	25.00	180	209
U-box	U-box domain	3.2E-22	68	21.40	273	342
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	3.5E-05	14	20.70	275	314
zf-C3HC4_4	zinc finger of C3HC4-type, RING	4.3E-05	13	30.00	278	314
zf-RING_UBOX	RING-type zinc-finger	0.00011	12	25.20	278	314
REV1_C	DNA repair protein REV1 C-terminal domain	0.0013	9	26.50	415	455
Arm	Armadillo/beta-catenin-like repeat	0.34	1	20.60	457	478
KAP	Kinesin-associated protein (KAP)	7.6E-07	17	19.40	462	665
Atx10homo_assoc	Spinocerebellar ataxia type 10 protein domain	0.0015	8	22.40	463	508
Arm	Armadillo/beta-catenin-like repeat	0.022	5	20.60	501	524
UNC45-central	Myosin-binding striated muscle assembly central	0.003	7	24.50	505	573
Arm	Armadillo/beta-catenin-like repeat	9.2E-05	12	20.60	542	580
DUF3361	Domain of unknown function (DUF3361)	0.00015	12	27.20	553	663
UNC45-central	Myosin-binding striated muscle assembly central	0.0037	7	24.50	589	663
DUF2732	Protein of unknown function (DUF2732)	0.035	4	25.00	614	642
Atx10homo_assoc	Spinocerebellar ataxia type 10 protein domain	0.22	1	22.40	628	669
Arm	Armadillo/beta-catenin-like repeat	0.26	1	20.60	629	664
Arm	Armadillo/beta-catenin-like repeat	0.0096	6	20.60	670	685