c2pfam

AT1G68050.1 :

Domain Description Evalue Bits GA Start End
PAS_9 PAS domain 2.4E-20 63 27.00 62 163
PAS_4 PAS fold 9E-07 19 23.10 62 162
PAS PAS fold 1.6E-10 31 22.60 69 162
PAS_3 PAS fold 7.6E-10 29 20.70 69 162
F-box F-box domain 5.1E-07 19 20.50 211 250
F-box-like F-box-like 4E-05 13 24.30 221 250
Kelch_3 Galactose oxidase, central domain 0.42 1 21.90 292 312
Kelch_5 Kelch motif 0.00012 12 27.00 304 338
Kelch_1 Kelch motif 4.8E-07 19 20.10 304 347
Kelch_6 Kelch motif 2.3E-05 14 25.30 305 339
Kelch_2 Kelch motif 0.0014 9 21.30 305 345
Kelch_4 Galactose oxidase, central domain 7.8E-14 41 21.60 305 355
Kelch_3 Galactose oxidase, central domain 2.4E-10 30 21.90 314 363
Kelch_5 Kelch motif 5.2E-06 16 27.00 354 391
Kelch_4 Galactose oxidase, central domain 8.1E-11 32 21.60 356 407
Kelch_2 Kelch motif 4.7E-06 16 21.30 357 401
Kelch_6 Kelch motif 0.003 8 25.30 357 408
Kelch_1 Kelch motif 2E-05 14 20.10 370 401
Kelch_3 Galactose oxidase, central domain 2.1E-14 43 21.90 370 417
Kelch_5 Kelch motif 1.9E-05 14 27.00 406 445
Kelch_4 Galactose oxidase, central domain 5.2E-10 29 21.60 408 456
Kelch_2 Kelch motif 7.7E-05 13 21.30 411 454
Kelch_6 Kelch motif 0.00064 10 25.30 412 455
Kelch_1 Kelch motif 0.00021 11 20.10 419 455
Kelch_3 Galactose oxidase, central domain 6.2E-11 32 21.90 419 470
Kelch_5 Kelch motif 7E-05 12 27.00 459 482
Kelch_4 Galactose oxidase, central domain 0.00023 11 21.60 462 509
Kelch_6 Kelch motif 0.0086 6 25.30 462 499
Kelch_2 Kelch motif 6E-05 13 21.30 463 511
Kelch_1 Kelch motif 0.25 1 20.10 468 508
Kelch_3 Galactose oxidase, central domain 0.16 2 21.90 475 515
Kelch_5 Kelch motif 0.0014 8 27.00 519 544
Kelch_4 Galactose oxidase, central domain 1.5E-06 18 21.60 522 567
Kelch_6 Kelch motif 0.0028 8 25.30 522 557
Kelch_2 Kelch motif 1.4E-08 24 21.30 524 571
Kelch_1 Kelch motif 0.044 3 20.10 528 566
Kelch_3 Galactose oxidase, central domain 0.17 2 21.90 535 582
Kelch_4 Galactose oxidase, central domain 0.00045 10 21.60 578 614
Kelch_2 Kelch motif 0.0035 7 21.30 578 598
Kelch_6 Kelch motif 0.0022 8 25.30 578 598
Kelch_5 Kelch motif 0.056 3 27.00 579 613
Kelch_1 Kelch motif 0.001 9 20.10 580 598

619

PAS_9
PAS_4
PAS
PAS_3
F-box
F-box-like
Kelch_3
Kelch_5
Kelch_1
Kelch_6
Kelch_2
Kelch_4
Kelch_3
Kelch_5
Kelch_4
Kelch_2
Kelch_6
Kelch_1
Kelch_3
Kelch_5
Kelch_4
Kelch_2
Kelch_6
Kelch_1
Kelch_3
Kelch_5
Kelch_4
Kelch_6
Kelch_2
Kelch_1
Kelch_3
Kelch_5
Kelch_4
Kelch_6
Kelch_2
Kelch_1
Kelch_3
Kelch_4
Kelch_2
Kelch_6
Kelch_5
Kelch_1

References:

Kelch_3

Kelch_2
8126718 Drosophila kelch motif is derived from a common enzyme fold. J Mol Biol 1994;236:1277-1282.
2002850 Novel thioether bond revealed by a 1.7 A crystal structure of galactose oxidase. Nature 1991;350:87-90.
15475350 Crystal structure of the Kelch domain of human Keap1. J Biol Chem 2004;279:54750-54758.

Kelch_1
8126718 Drosophila kelch motif is derived from a common enzyme fold. J Mol Biol 1994;236:1277-1282.
2002850 Novel thioether bond revealed by a 1.7 A crystal structure of galactose oxidase. Nature 1991;350:87-90.
15475350 Crystal structure of the Kelch domain of human Keap1. J Biol Chem 2004;279:54750-54758.

PAS_4
9301332 PAS domain S-boxes in archaea, bacteria and sensors for oxygen and redox. Trends Biochem Sci 1997;22:331-333.
7756254 1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore. Biochemistry 1995;34:6278-6287.
9382818 PAS: a multifunctional domain family comes to light. Curr Biol 1997;7:674-677.
15009198 The PAS fold: a redefination of the PAS domain based upon structural prediction. Eur J Biochem 2004;271:1198-1208.

PAS_9

PAS_3
9301332 PAS domain S-boxes in archaea, bacteria and sensors for oxygen and redox. Trends Biochem Sci 1997;22:331-333.
7756254 1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore. Biochemistry 1995;34:6278-6287.
9382818 PAS: a multifunctional domain family comes to light. Curr Biol 1997;7:674-677.
15009198 The PAS fold: a redefination of the PAS domain based upon structural prediction. Eur J Biochem 2004;271:1198-1208.

PAS
9301332 PAS domain S-boxes in archaea, bacteria and sensors for oxygen and redox. Trends Biochem Sci 1997;22:331-333.
7756254 1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore. Biochemistry 1995;34:6278-6287.
9382818 PAS: a multifunctional domain family comes to light. Curr Biol 1997;7:674-677.
15009198 The PAS fold: a redefination of the PAS domain based upon structural prediction. Eur J Biochem 2004;271:1198-1208.

F-box
8706131 SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box. Cell 1996;86:263-274.
9346238 F-box proteins are receptors that recruit phosphorylated substrates to the SCF ubiquitin-ligase complex. Cell. 1997;91:209-219.

F-box-like

Kelch_6

Kelch_5

Kelch_4

Domain	Description	Evalue	Bits	GA	Start	End
PAS_9	PAS domain	2.4E-20	63	27.00	62	163
PAS_4	PAS fold	9E-07	19	23.10	62	162
PAS	PAS fold	1.6E-10	31	22.60	69	162
PAS_3	PAS fold	7.6E-10	29	20.70	69	162
F-box	F-box domain	5.1E-07	19	20.50	211	250
F-box-like	F-box-like	4E-05	13	24.30	221	250
Kelch_3	Galactose oxidase, central domain	0.42	1	21.90	292	312
Kelch_5	Kelch motif	0.00012	12	27.00	304	338
Kelch_1	Kelch motif	4.8E-07	19	20.10	304	347
Kelch_6	Kelch motif	2.3E-05	14	25.30	305	339
Kelch_2	Kelch motif	0.0014	9	21.30	305	345
Kelch_4	Galactose oxidase, central domain	7.8E-14	41	21.60	305	355
Kelch_3	Galactose oxidase, central domain	2.4E-10	30	21.90	314	363
Kelch_5	Kelch motif	5.2E-06	16	27.00	354	391
Kelch_4	Galactose oxidase, central domain	8.1E-11	32	21.60	356	407
Kelch_2	Kelch motif	4.7E-06	16	21.30	357	401
Kelch_6	Kelch motif	0.003	8	25.30	357	408
Kelch_1	Kelch motif	2E-05	14	20.10	370	401
Kelch_3	Galactose oxidase, central domain	2.1E-14	43	21.90	370	417
Kelch_5	Kelch motif	1.9E-05	14	27.00	406	445
Kelch_4	Galactose oxidase, central domain	5.2E-10	29	21.60	408	456
Kelch_2	Kelch motif	7.7E-05	13	21.30	411	454
Kelch_6	Kelch motif	0.00064	10	25.30	412	455
Kelch_1	Kelch motif	0.00021	11	20.10	419	455
Kelch_3	Galactose oxidase, central domain	6.2E-11	32	21.90	419	470
Kelch_5	Kelch motif	7E-05	12	27.00	459	482
Kelch_4	Galactose oxidase, central domain	0.00023	11	21.60	462	509
Kelch_6	Kelch motif	0.0086	6	25.30	462	499
Kelch_2	Kelch motif	6E-05	13	21.30	463	511
Kelch_1	Kelch motif	0.25	1	20.10	468	508
Kelch_3	Galactose oxidase, central domain	0.16	2	21.90	475	515
Kelch_5	Kelch motif	0.0014	8	27.00	519	544
Kelch_4	Galactose oxidase, central domain	1.5E-06	18	21.60	522	567
Kelch_6	Kelch motif	0.0028	8	25.30	522	557
Kelch_2	Kelch motif	1.4E-08	24	21.30	524	571
Kelch_1	Kelch motif	0.044	3	20.10	528	566
Kelch_3	Galactose oxidase, central domain	0.17	2	21.90	535	582
Kelch_4	Galactose oxidase, central domain	0.00045	10	21.60	578	614
Kelch_2	Kelch motif	0.0035	7	21.30	578	598
Kelch_6	Kelch motif	0.0022	8	25.30	578	598
Kelch_5	Kelch motif	0.056	3	27.00	579	613
Kelch_1	Kelch motif	0.001	9	20.10	580	598