c2pfam

AT1G68240.1 :

Domain Description Evalue Bits GA Start End
Med30 Mediator complex subunit 30 7.9E-05 11 21.20 21 87
Phage_min_cap2 Phage minor capsid protein 2 2.1E-06 14 20.00 41 87
HLH Helix-loop-helix DNA-binding domain 1.3E-11 32 20.70 74 118
Med30 Mediator complex subunit 30 0.49 -2 21.20 106 124

185

Med30
Phage_min_cap2
HLH
Med30

References:

Phage_min_cap2
8497043 Molecular comparison of the structural proteins encoding gene clusters of two related Lactobacillus delbrueckii bacteriophages. J Virol 1993;67:3061-3068.

HLH
7553065 Transcription factors 2: helix-loop-helix. Protein Profile 1995;2:621-702.

Med30
15175151 A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II. Mol Cell. 2004;14:553-557.
11909976 Requirement of TRAP/mediator for both activator-independent and activator-dependent transcription in conjunction with TFIID-associated TAF(II)s. Mol Cell Biol. 2002;22:2842-2852.

Domain	Description	Evalue	Bits	GA	Start	End
Med30	Mediator complex subunit 30	7.9E-05	11	21.20	21	87
Phage_min_cap2	Phage minor capsid protein 2	2.1E-06	14	20.00	41	87
HLH	Helix-loop-helix DNA-binding domain	1.3E-11	32	20.70	74	118
Med30	Mediator complex subunit 30	0.49	-2	21.20	106	124