c2pfam

AT1G69330.1 :

Domain Description Evalue Bits GA Start End
E3_UbLigase_R4 E3 ubiquitin-protein ligase UBR4 0.00021 9 23.00 7 53
FYVE FYVE zinc finger 9.4E-07 19 26.80 37 78
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 5.5E-06 16 27.00 43 78
zf-RING_11 RING-like zinc finger 1.3E-05 15 27.00 44 67
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 8.9E-07 19 27.00 44 73
zf-RING_5 zinc-RING finger domain 2.8E-09 27 27.90 44 85
zf-RING_2 Ring finger domain 3.4E-09 27 27.30 44 100
Prok-RING_4 Prokaryotic RING finger family 4 0.1 2 27.00 44 50
Prok-RING_4 Prokaryotic RING finger family 4 0.03 4 27.00 45 99
zf-RING_UBOX RING-type zinc-finger 3.1E-11 33 25.20 45 84
zf-C3HC4_4 zinc finger of C3HC4-type, RING 1.1E-06 19 30.00 45 78
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 9.7E-07 18 21.00 45 79
DUF2207 Predicted membrane protein (DUF2207) 0.00023 10 23.00 213 263

270

E3_UbLigase_R4
FYVE
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-RING_2
Prok-RING_4
Prok-RING_4
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
DUF2207

References:

DUF2207

zf-C3HC4_4

zf-C3HC4_3

zf-C3HC4_2

zf-RING_UBOX

E3_UbLigase_R4

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-RING_5

zf-RING_2

Prok-RING_4

FYVE
8798641 Endosomal localization of the autoantigen EEA1 is mediated by a zinc-binding FYVE finger. J Biol Chem 1996;271:24048-24054.
9697764 FYVE fingers bind PtdIns(3)P. Nature 1998;394:432-433.
10564636 FYVE-finger proteins - effectors of an inositol lipid. J Cell Sci 1999;112:4175-4183.

zf-RING_11

Domain	Description	Evalue	Bits	GA	Start	End
E3_UbLigase_R4	E3 ubiquitin-protein ligase UBR4	0.00021	9	23.00	7	53
FYVE	FYVE zinc finger	9.4E-07	19	26.80	37	78
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	5.5E-06	16	27.00	43	78
zf-RING_11	RING-like zinc finger	1.3E-05	15	27.00	44	67
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	8.9E-07	19	27.00	44	73
zf-RING_5	zinc-RING finger domain	2.8E-09	27	27.90	44	85
zf-RING_2	Ring finger domain	3.4E-09	27	27.30	44	100
Prok-RING_4	Prokaryotic RING finger family 4	0.1	2	27.00	44	50
Prok-RING_4	Prokaryotic RING finger family 4	0.03	4	27.00	45	99
zf-RING_UBOX	RING-type zinc-finger	3.1E-11	33	25.20	45	84
zf-C3HC4_4	zinc finger of C3HC4-type, RING	1.1E-06	19	30.00	45	78
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	9.7E-07	18	21.00	45	79
DUF2207	Predicted membrane protein (DUF2207)	0.00023	10	23.00	213	263