c2pfam

AT1G69780.1 :

Domain Description Evalue Bits GA Start End
K-box K-box region 0.01 6 20.60 81 115
BRE1 BRE1 E3 ubiquitin ligase 0.54 1 23.40 81 103
Homeodomain Homeodomain 2.4E-18 56 22.90 85 138
LPD5 Large polyvalent protein-associated domain 5 4.5E-05 14 27.00 98 181
Homeobox_KN Homeobox KN domain 7.1E-07 19 19.80 109 136
CASP_C CASP C terminal 0.0012 8 23.80 128 187
bZIP_1 bZIP transcription factor 9.7E-05 13 22.00 136 174
BRE1 BRE1 E3 ubiquitin ligase 0.001 9 23.40 138 191
DUF2205 Predicted coiled-coil protein (DUF2205) 0.00049 10 26.70 138 177
GrpE GrpE 2.1E-05 14 25.80 139 215
YabA Initiation control protein YabA 1.2E-05 16 30.00 139 194
Scaffolding_pro Phi29 scaffolding protein 4.6E-05 14 25.00 140 178
HALZ Homeobox associated leucine zipper 9E-20 61 26.30 140 182
Bap31_Bap29_C Bap31/Bap29 cytoplasmic coiled-coil domain 5.5E-06 16 30.00 141 173
K-box K-box region 0.0019 9 20.60 143 174
DivIC Septum formation initiator 6.9E-06 16 24.00 145 181
NRBF2 Nuclear receptor-binding factor 2, autophagy regulator 7.8E-06 16 36.80 147 182

294

K-box
BRE1
Homeodomain
LPD5
Homeobox_KN
CASP_C
bZIP_1
BRE1
DUF2205
GrpE
YabA
Scaffolding_pro
HALZ
Bap31_Bap29_C
K-box
DivIC
NRBF2

References:

bZIP_1

GrpE
9103205 Crystal structure of the nucleotide exchange factor GrpE bound to the ATPase domain of the molecular chaperone DnaK. Science 1997;276:431-435.

CASP_C
12429822 CASP, the alternatively spliced product of the gene encoding the CCAAT-displacement protein transcription factor, is a Golgi membrane protein related to giantin. Mol Biol Cell 2002;13:3761-3774.

LPD5

NRBF2

BRE1
16337599 The human homolog of yeast BRE1 functions as a transcriptional coactivator through direct activator interactions. Mol Cell. 2005;20:759-770.

Homeodomain

Homeobox_KN

Bap31_Bap29_C

DUF2205

YabA

Scaffolding_pro
12778115 Bacteriophage phi29 scaffolding protein gp7 before and after prohead assembly. Nat Struct Biol. 2003;10:572-576.

K-box
7958839 Function and regulation of the Arabidopsis floral homeotic gene PISTILLATA. Genes Dev 1994;8:1548-1560.
2031185 Predicting coiled coils from protein sequences. Science 1991;252:1162-1164.

DivIC
8113187 Characterization of a cell division gene from Bacillus subtilis that is required for vegetative and sporulation septum formation. J Bacteriol 1994;176:1451-1459.

HALZ

Domain	Description	Evalue	Bits	GA	Start	End
K-box	K-box region	0.01	6	20.60	81	115
BRE1	BRE1 E3 ubiquitin ligase	0.54	1	23.40	81	103
Homeodomain	Homeodomain	2.4E-18	56	22.90	85	138
LPD5	Large polyvalent protein-associated domain 5	4.5E-05	14	27.00	98	181
Homeobox_KN	Homeobox KN domain	7.1E-07	19	19.80	109	136
CASP_C	CASP C terminal	0.0012	8	23.80	128	187
bZIP_1	bZIP transcription factor	9.7E-05	13	22.00	136	174
BRE1	BRE1 E3 ubiquitin ligase	0.001	9	23.40	138	191
DUF2205	Predicted coiled-coil protein (DUF2205)	0.00049	10	26.70	138	177
GrpE	GrpE	2.1E-05	14	25.80	139	215
YabA	Initiation control protein YabA	1.2E-05	16	30.00	139	194
Scaffolding_pro	Phi29 scaffolding protein	4.6E-05	14	25.00	140	178
HALZ	Homeobox associated leucine zipper	9E-20	61	26.30	140	182
Bap31_Bap29_C	Bap31/Bap29 cytoplasmic coiled-coil domain	5.5E-06	16	30.00	141	173
K-box	K-box region	0.0019	9	20.60	143	174
DivIC	Septum formation initiator	6.9E-06	16	24.00	145	181
NRBF2	Nuclear receptor-binding factor 2, autophagy regulator	7.8E-06	16	36.80	147	182