c2pfam

AT1G71830.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 4E-12 36 20.70 27 66
LRR_6 Leucine Rich repeat 0.042 4 23.40 93 107
LRR_4 Leucine Rich repeats (2 copies) 5.4E-07 19 27.00 93 132
LRR_1 Leucine Rich Repeat 0.0021 8 20.60 94 116
LRR_8 Leucine rich repeat 2.1E-09 26 27.00 94 153
LRR_6 Leucine Rich repeat 0.83 0 23.40 116 129
LRR_1 Leucine Rich Repeat 0.023 5 20.60 118 140
LRR_6 Leucine Rich repeat 0.3 1 23.40 141 155
LRR_1 Leucine Rich Repeat 0.0036 8 20.60 142 161
LRR_4 Leucine Rich repeats (2 copies) 3.3E-08 23 27.00 142 179
LRR_8 Leucine rich repeat 1.9E-05 14 27.00 146 179
LRR_6 Leucine Rich repeat 0.0022 8 23.40 165 179
LRR_1 Leucine Rich Repeat 0.001 9 20.60 167 182
Pkinase Protein kinase domain 0 151 20.40 303 574
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 149 23.10 305 576
APH Phosphotransferase enzyme family 2.3E-06 17 22.40 374 455
Pkinase_fungal Fungal protein kinase 8E-06 14 24.10 422 478

625

LRRNT_2
LRR_6
LRR_4
LRR_1
LRR_8
LRR_6
LRR_1
LRR_6
LRR_1
LRR_4
LRR_8
LRR_6
LRR_1
Pkinase
PK_Tyr_Ser-Thr
APH
Pkinase_fungal

References:

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

Pkinase_fungal

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_8

LRR_6

LRR_4

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	4E-12	36	20.70	27	66
LRR_6	Leucine Rich repeat	0.042	4	23.40	93	107
LRR_4	Leucine Rich repeats (2 copies)	5.4E-07	19	27.00	93	132
LRR_1	Leucine Rich Repeat	0.0021	8	20.60	94	116
LRR_8	Leucine rich repeat	2.1E-09	26	27.00	94	153
LRR_6	Leucine Rich repeat	0.83	0	23.40	116	129
LRR_1	Leucine Rich Repeat	0.023	5	20.60	118	140
LRR_6	Leucine Rich repeat	0.3	1	23.40	141	155
LRR_1	Leucine Rich Repeat	0.0036	8	20.60	142	161
LRR_4	Leucine Rich repeats (2 copies)	3.3E-08	23	27.00	142	179
LRR_8	Leucine rich repeat	1.9E-05	14	27.00	146	179
LRR_6	Leucine Rich repeat	0.0022	8	23.40	165	179
LRR_1	Leucine Rich Repeat	0.001	9	20.60	167	182
Pkinase	Protein kinase domain	0	151	20.40	303	574
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	149	23.10	305	576
APH	Phosphotransferase enzyme family	2.3E-06	17	22.40	374	455
Pkinase_fungal	Fungal protein kinase	8E-06	14	24.10	422	478