AT1G72090.1 :
Domain
Description
Evalue
Bits
GA
Start
End
TraT
Enterobacterial TraT complement resistance protein
3.3E-05
12
27.50
62
126
UPF0004
Uncharacterized protein family UPF0004
6.5E-23
69
21.30
66
144
Radical_SAM
Radical SAM superfamily
2.1E-23
72
29.30
204
376
TRAM
TRAM domain
7.9E-06
14
20.80
431
487
601
TraT
UPF0004
Radical_SAM
TRAM
References:
TraT
9933744
Expression of foreign antigens on the surface of Escherichia coli by fusion to the outer membrane protein traT.
J Biomed Sci 1999;6:64-70.
3323526
Surface exclusion genes traS and traT of the F sex factor of Escherichia coli K-12. Determination of the nucleotide sequence and promoter and terminator activities.
J Mol Biol 1987;198:1-11.
Radical_SAM
11222759
Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods.
Nucleic Acids Res 2001;29:1097-1106.
17335281
Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to catalyze in vitro sulfatase post-translational modification.
J Am Chem Soc. 2007;129:3462-3463.
16766528
A new type of bacterial sulfatase reveals a novel maturation pathway in prokaryotes.
J Biol Chem. 2006;281:22464-22470.
UPF0004
11313137
TRAM, a predicted RNA-binding domain, common to tRNA uracil methylation and adenine thiolation enzymes.
FEMS Microbiol Lett 2001;197:215-221.
11882645
Enzymatic modification of tRNAs: MiaB is an iron-sulfur protein.
J Biol Chem 2002;277:13367-13370.
TRAM
11313137
TRAM, a predicted RNA-binding domain, common to tRNA uracil methylation and adenine thiolation enzymes.
FEMS Microbiol Lett 2001;197:215-221.