c2pfam

AT1G74250.1 :

Domain Description Evalue Bits GA Start End
DnaJ DnaJ domain 1.3E-23 73 20.70 12 78
zf-C2H2_12 Spin-doc zinc-finger 0.00016 11 26.80 302 333
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 1.6E-06 18 26.90 305 344
DUF2256 Uncharacterized protein conserved in bacteria (DUF2256) 0.0011 9 25.00 306 325
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 3.7E-13 39 22.60 307 333
zf-met Zinc-finger of C2H2 type 3E-10 30 21.20 308 332
zf-C2H2_4 C2H2-type zinc finger 4.3E-05 14 27.00 309 329
zf-C2H2_6 C2H2-type zinc finger 0.027 4 25.00 310 329
zf-LYAR LYAR-type C2HC zinc finger 9.9E-05 12 20.70 310 328
zf-C2H2 Zinc finger, C2H2 type 0.0093 6 20.80 312 329
OrfB_Zn_ribbon Putative transposase DNA-binding domain 0.00017 11 26.30 582 611
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 3.1E-05 14 26.90 597 628
DUF2256 Uncharacterized protein conserved in bacteria (DUF2256) 0.024 4 25.00 599 617
zf-C2H2_6 C2H2-type zinc finger 0.0015 8 25.00 601 620
zf-C2H2 Zinc finger, C2H2 type 0.00085 10 20.80 601 620
zf-C2H2_4 C2H2-type zinc finger 0.00017 12 27.00 601 620

630

DnaJ
zf-C2H2_12
zf-C2H2_2
DUF2256
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_6
zf-LYAR
zf-C2H2
OrfB_Zn_ribbon
zf-C2H2_2
DUF2256
zf-C2H2_6
zf-C2H2
zf-C2H2_4

References:

zf-C2H2_6

zf-met

DnaJ
8016869 DnaJ-like proteins: molecular chaperones and specific regulators of Hsp70. Trends Biochem Sci 1994;19:176-181.
9271376 Inactivation of pRB-related proteins p130 and p107 mediated by the J domain of simian virus 40 large T antigen. Mol Cell Biol 1997;17:4979-4990.
8764403 NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperone. J Mol Biol 1996;260:236-250.
9644977 The J-domain family and the recruitment of chaperone power. Trends Biochem Sci 1998;23:222-227.

zf-C2H2_12

zf-C2H2_4

DUF2256

zf-C2H2_2

zf-LYAR
8491376 LYAR, a novel nucleolar protein with zinc finger DNA-binding motifs, is involved in cell growth regulation. Genes Dev. 1993;7:735-748.

zf-C2H2
9171100 Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins. Nucleic Acids Res 1997;25:2464-2469.
12683994 Assessment by molecular dynamics simulations of the structural determinants of DNA-binding specificity for transcription factor Sp1. J Mol Biol 2003;328:9-32.

OrfB_Zn_ribbon

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

Domain	Description	Evalue	Bits	GA	Start	End
DnaJ	DnaJ domain	1.3E-23	73	20.70	12	78
zf-C2H2_12	Spin-doc zinc-finger	0.00016	11	26.80	302	333
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	1.6E-06	18	26.90	305	344
DUF2256	Uncharacterized protein conserved in bacteria (DUF2256)	0.0011	9	25.00	306	325
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	3.7E-13	39	22.60	307	333
zf-met	Zinc-finger of C2H2 type	3E-10	30	21.20	308	332
zf-C2H2_4	C2H2-type zinc finger	4.3E-05	14	27.00	309	329
zf-C2H2_6	C2H2-type zinc finger	0.027	4	25.00	310	329
zf-LYAR	LYAR-type C2HC zinc finger	9.9E-05	12	20.70	310	328
zf-C2H2	Zinc finger, C2H2 type	0.0093	6	20.80	312	329
OrfB_Zn_ribbon	Putative transposase DNA-binding domain	0.00017	11	26.30	582	611
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	3.1E-05	14	26.90	597	628
DUF2256	Uncharacterized protein conserved in bacteria (DUF2256)	0.024	4	25.00	599	617
zf-C2H2_6	C2H2-type zinc finger	0.0015	8	25.00	601	620
zf-C2H2	Zinc finger, C2H2 type	0.00085	10	20.80	601	620
zf-C2H2_4	C2H2-type zinc finger	0.00017	12	27.00	601	620