c2pfam

AT1G74360.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 4.5E-07 20 20.70 39 82
LRR_8 Leucine rich repeat 1.4E-10 30 27.00 105 145
LRR_4 Leucine Rich repeats (2 copies) 1.1E-08 25 27.00 111 147
LRR_6 Leucine Rich repeat 0.0014 8 23.40 113 126
LRR_1 Leucine Rich Repeat 0.0026 8 20.60 113 134
LRR_6 Leucine Rich repeat 0.0014 8 23.40 134 145
LRR_1 Leucine Rich Repeat 0.00025 11 20.60 136 151
LRR_8 Leucine rich repeat 0.00017 11 27.00 155 171
LRR_6 Leucine Rich repeat 0.00079 9 23.40 157 172
LRR_1 Leucine Rich Repeat 0.022 5 20.60 158 177
LRR_4 Leucine Rich repeats (2 copies) 0.00038 11 27.00 158 175
LRR_4 Leucine Rich repeats (2 copies) 0.00028 11 27.00 184 217
LRR_8 Leucine rich repeat 7.4E-06 15 27.00 188 239
LRR_6 Leucine Rich repeat 0.0066 6 23.40 205 221
LRR_1 Leucine Rich Repeat 0.21 2 20.60 207 221
LRR_8 Leucine rich repeat 3.2E-07 20 27.00 229 288
LRR_6 Leucine Rich repeat 0.00083 9 23.40 251 267
LRR_4 Leucine Rich repeats (2 copies) 1.7E-06 18 27.00 253 291
LRR_1 Leucine Rich Repeat 0.22 2 20.60 254 273
LRR_6 Leucine Rich repeat 0.27 1 23.40 274 290
LRR_1 Leucine Rich Repeat 0.1 3 20.60 277 296
LRR_8 Leucine rich repeat 4.5E-10 29 27.00 277 336
LRR_4 Leucine Rich repeats (2 copies) 2.9E-07 20 27.00 301 335
LRR_1 Leucine Rich Repeat 0.095 3 20.60 301 323
LRR_6 Leucine Rich repeat 0.011 6 23.40 323 339
LRR_1 Leucine Rich Repeat 0.14 3 20.60 325 339
LRR_8 Leucine rich repeat 2.1E-09 27 27.00 349 409
LRR_4 Leucine Rich repeats (2 copies) 0.0007 10 27.00 350 387
LRR_6 Leucine Rich repeat 0.032 4 23.40 373 387
LRR_1 Leucine Rich Repeat 0.039 5 20.60 374 390
LRR_6 Leucine Rich repeat 0.18 2 23.40 397 412
LRR_4 Leucine Rich repeats (2 copies) 2E-07 21 27.00 397 436
LRR_8 Leucine rich repeat 1.4E-11 34 27.00 421 481
LRR_6 Leucine Rich repeat 0.0027 8 23.40 422 435
LRR_1 Leucine Rich Repeat 0.00026 11 20.60 423 444
LRR_4 Leucine Rich repeats (2 copies) 0.048 4 27.00 446 480
LRR_1 Leucine Rich Repeat 0.25 2 20.60 450 468
LRR_8 Leucine rich repeat 0.00024 10 27.00 570 605
LRR_4 Leucine Rich repeats (2 copies) 0.00054 10 27.00 574 605
LRR_1 Leucine Rich Repeat 0.29 2 20.60 574 591
LRR_6 Leucine Rich repeat 0.59 0 23.40 574 585
LRR_1 Leucine Rich Repeat 0.12 3 20.60 595 615
LRR_6 Leucine Rich repeat 0.93 0 23.40 596 607
LRR_1 Leucine Rich Repeat 0.06 4 20.60 621 640
LRR_4 Leucine Rich repeats (2 copies) 0.0009 9 27.00 621 655
LRR_8 Leucine rich repeat 3E-06 17 27.00 622 676
LRR_6 Leucine Rich repeat 0.44 1 23.40 622 632
LRR_6 Leucine Rich repeat 0.056 3 23.40 642 655
LRR_4 Leucine Rich repeats (2 copies) 0.0012 9 27.00 642 678
LRR_1 Leucine Rich Repeat 0.15 3 20.60 643 661
Rax2 Cortical protein marker for cell polarity 1.4E-06 17 27.80 724 777
Pkinase Protein kinase domain 0 161 20.40 815 1083
ABC1 ABC1 family 8.4E-05 12 20.60 817 850
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 147 23.10 817 1084
APH Phosphotransferase enzyme family 0.0084 5 22.40 823 930
APH Phosphotransferase enzyme family 6.2E-05 12 22.40 932 965

1106

LRRNT_2
LRR_8
LRR_4
LRR_6
LRR_1
LRR_6
LRR_1
LRR_8
LRR_6
LRR_1
LRR_4
LRR_4
LRR_8
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_1
LRR_8
LRR_4
LRR_6
LRR_1
LRR_6
LRR_4
LRR_8
LRR_6
LRR_1
LRR_4
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_1
LRR_6
LRR_1
LRR_4
LRR_8
LRR_6
LRR_6
LRR_4
LRR_1
Rax2
Pkinase
ABC1
PK_Tyr_Ser-Thr
APH
APH

References:

LRR_8

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

Rax2

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_4

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	4.5E-07	20	20.70	39	82
LRR_8	Leucine rich repeat	1.4E-10	30	27.00	105	145
LRR_4	Leucine Rich repeats (2 copies)	1.1E-08	25	27.00	111	147
LRR_6	Leucine Rich repeat	0.0014	8	23.40	113	126
LRR_1	Leucine Rich Repeat	0.0026	8	20.60	113	134
LRR_6	Leucine Rich repeat	0.0014	8	23.40	134	145
LRR_1	Leucine Rich Repeat	0.00025	11	20.60	136	151
LRR_8	Leucine rich repeat	0.00017	11	27.00	155	171
LRR_6	Leucine Rich repeat	0.00079	9	23.40	157	172
LRR_1	Leucine Rich Repeat	0.022	5	20.60	158	177
LRR_4	Leucine Rich repeats (2 copies)	0.00038	11	27.00	158	175
LRR_4	Leucine Rich repeats (2 copies)	0.00028	11	27.00	184	217
LRR_8	Leucine rich repeat	7.4E-06	15	27.00	188	239
LRR_6	Leucine Rich repeat	0.0066	6	23.40	205	221
LRR_1	Leucine Rich Repeat	0.21	2	20.60	207	221
LRR_8	Leucine rich repeat	3.2E-07	20	27.00	229	288
LRR_6	Leucine Rich repeat	0.00083	9	23.40	251	267
LRR_4	Leucine Rich repeats (2 copies)	1.7E-06	18	27.00	253	291
LRR_1	Leucine Rich Repeat	0.22	2	20.60	254	273
LRR_6	Leucine Rich repeat	0.27	1	23.40	274	290
LRR_1	Leucine Rich Repeat	0.1	3	20.60	277	296
LRR_8	Leucine rich repeat	4.5E-10	29	27.00	277	336
LRR_4	Leucine Rich repeats (2 copies)	2.9E-07	20	27.00	301	335
LRR_1	Leucine Rich Repeat	0.095	3	20.60	301	323
LRR_6	Leucine Rich repeat	0.011	6	23.40	323	339
LRR_1	Leucine Rich Repeat	0.14	3	20.60	325	339
LRR_8	Leucine rich repeat	2.1E-09	27	27.00	349	409
LRR_4	Leucine Rich repeats (2 copies)	0.0007	10	27.00	350	387
LRR_6	Leucine Rich repeat	0.032	4	23.40	373	387
LRR_1	Leucine Rich Repeat	0.039	5	20.60	374	390
LRR_6	Leucine Rich repeat	0.18	2	23.40	397	412
LRR_4	Leucine Rich repeats (2 copies)	2E-07	21	27.00	397	436
LRR_8	Leucine rich repeat	1.4E-11	34	27.00	421	481
LRR_6	Leucine Rich repeat	0.0027	8	23.40	422	435
LRR_1	Leucine Rich Repeat	0.00026	11	20.60	423	444
LRR_4	Leucine Rich repeats (2 copies)	0.048	4	27.00	446	480
LRR_1	Leucine Rich Repeat	0.25	2	20.60	450	468
LRR_8	Leucine rich repeat	0.00024	10	27.00	570	605
LRR_4	Leucine Rich repeats (2 copies)	0.00054	10	27.00	574	605
LRR_1	Leucine Rich Repeat	0.29	2	20.60	574	591
LRR_6	Leucine Rich repeat	0.59	0	23.40	574	585
LRR_1	Leucine Rich Repeat	0.12	3	20.60	595	615
LRR_6	Leucine Rich repeat	0.93	0	23.40	596	607
LRR_1	Leucine Rich Repeat	0.06	4	20.60	621	640
LRR_4	Leucine Rich repeats (2 copies)	0.0009	9	27.00	621	655
LRR_8	Leucine rich repeat	3E-06	17	27.00	622	676
LRR_6	Leucine Rich repeat	0.44	1	23.40	622	632
LRR_6	Leucine Rich repeat	0.056	3	23.40	642	655
LRR_4	Leucine Rich repeats (2 copies)	0.0012	9	27.00	642	678
LRR_1	Leucine Rich Repeat	0.15	3	20.60	643	661
Rax2	Cortical protein marker for cell polarity	1.4E-06	17	27.80	724	777
Pkinase	Protein kinase domain	0	161	20.40	815	1083
ABC1	ABC1 family	8.4E-05	12	20.60	817	850
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	147	23.10	817	1084
APH	Phosphotransferase enzyme family	0.0084	5	22.40	823	930
APH	Phosphotransferase enzyme family	6.2E-05	12	22.40	932	965