c2pfam

AT1G75820.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 3E-10 30 20.70 26 67
LRR_4 Leucine Rich repeats (2 copies) 0.35 1 27.00 85 107
LRR_4 Leucine Rich repeats (2 copies) 5.3E-05 14 27.00 94 132
LRR_8 Leucine rich repeat 6E-05 13 27.00 95 150
LRR_6 Leucine Rich repeat 0.029 5 23.40 117 132
LRR_4 Leucine Rich repeats (2 copies) 5.2E-05 14 27.00 118 158
LRR_8 Leucine rich repeat 1.6E-05 15 27.00 119 178
LRR_1 Leucine Rich Repeat 0.016 6 20.60 119 132
LRR_4 Leucine Rich repeats (2 copies) 0.0058 7 27.00 146 184
LRR_8 Leucine rich repeat 0.00011 12 27.00 153 201
LRR_4 Leucine Rich repeats (2 copies) 0.0043 8 27.00 168 201
LRR_1 Leucine Rich Repeat 0.031 5 20.60 169 187
LRR_4 Leucine Rich repeats (2 copies) 0.3 2 27.00 192 220
LRR_8 Leucine rich repeat 2.4E-05 14 27.00 193 252
DUF5612 Domain of unknown function (DUF5612) 0.13 2 25.00 240 283
LRR_4 Leucine Rich repeats (2 copies) 5E-06 17 27.00 241 278
LRR_6 Leucine Rich repeat 0.0079 6 23.40 241 256
LRR_1 Leucine Rich Repeat 0.002 9 20.60 242 264
LRR_8 Leucine rich repeat 7.6E-09 25 27.00 242 301
LRR_8 Leucine rich repeat 1.1E-08 25 27.00 266 325
LRR_4 Leucine Rich repeats (2 copies) 0.00024 11 27.00 290 327
LRR_1 Leucine Rich Repeat 0.0023 9 20.60 290 312
LRR_6 Leucine Rich repeat 0.011 6 23.40 290 304
LRR_2 Leucine Rich Repeat 0.41 2 20.90 290 304
LRR_4 Leucine Rich repeats (2 copies) 0.05 4 27.00 315 349
LRR_8 Leucine rich repeat 2.9E-07 20 27.00 337 395
LRR_4 Leucine Rich repeats (2 copies) 0.00025 11 27.00 362 402
LRR_6 Leucine Rich repeat 0.053 4 23.40 362 375
LRR_1 Leucine Rich Repeat 0.00075 10 20.60 362 382
DUF5612 Domain of unknown function (DUF5612) 0.074 3 25.00 381 426
LRR_1 Leucine Rich Repeat 0.014 6 20.60 386 408
LRR_4 Leucine Rich repeats (2 copies) 0.0019 9 27.00 386 421
LRR_8 Leucine rich repeat 0.0012 9 27.00 410 466
LRR_4 Leucine Rich repeats (2 copies) 4.1E-06 17 27.00 461 496
LRR_1 Leucine Rich Repeat 0.072 4 20.60 461 479
DUF5612 Domain of unknown function (DUF5612) 0.25 1 25.00 475 523
LRR_8 Leucine rich repeat 6E-09 26 27.00 480 540
LRR_1 Leucine Rich Repeat 0.18 3 20.60 481 500
LRR_2 Leucine Rich Repeat 0.018 6 20.90 481 494
LRR_4 Leucine Rich repeats (2 copies) 0.094 3 27.00 514 540
LRR_6 Leucine Rich repeat 0.0045 7 23.40 527 543
LRR_8 Leucine rich repeat 1.2E-10 31 27.00 529 588
LRR_4 Leucine Rich repeats (2 copies) 5.1E-06 17 27.00 530 564
LRR_1 Leucine Rich Repeat 0.27 2 20.60 530 548
LRR_4 Leucine Rich repeats (2 copies) 1.3E-09 28 27.00 552 589
LRR_1 Leucine Rich Repeat 0.015 6 20.60 553 574
LRR_6 Leucine Rich repeat 0.038 4 23.40 554 566
LRR_6 Leucine Rich repeat 0.00011 12 23.40 576 590
LRR_1 Leucine Rich Repeat 0.019 6 20.60 577 593
DUF3098 Protein of unknown function (DUF3098) 0.0011 8 25.00 630 659
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 148 23.10 693 967
Pkinase Protein kinase domain 0 145 20.40 693 965
DUF3098 Protein of unknown function (DUF3098) 0.29 1 25.00 726 757
Pkinase_fungal Fungal protein kinase 4.3E-05 12 24.10 798 860
APH Phosphotransferase enzyme family 6.6E-05 13 22.40 800 839
Qn_am_d_aIII Quinohemoprotein amine dehydrogenase, alpha subunit domain III 0.00066 10 21.20 868 915

980

LRRNT_2
LRR_4
LRR_4
LRR_8
LRR_6
LRR_4
LRR_8
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
LRR_4
LRR_8
DUF5612
LRR_4
LRR_6
LRR_1
LRR_8
LRR_8
LRR_4
LRR_1
LRR_6
LRR_2
LRR_4
LRR_8
LRR_4
LRR_6
LRR_1
DUF5612
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
DUF5612
LRR_8
LRR_1
LRR_2
LRR_4
LRR_6
LRR_8
LRR_4
LRR_1
LRR_4
LRR_1
LRR_6
LRR_6
LRR_1
DUF3098
PK_Tyr_Ser-Thr
Pkinase
DUF3098
Pkinase_fungal
APH
Qn_am_d_aIII

References:

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

Pkinase_fungal

DUF5612

DUF3098

LRR_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_8

LRR_6

LRR_4

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

Qn_am_d_aIII

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	3E-10	30	20.70	26	67
LRR_4	Leucine Rich repeats (2 copies)	0.35	1	27.00	85	107
LRR_4	Leucine Rich repeats (2 copies)	5.3E-05	14	27.00	94	132
LRR_8	Leucine rich repeat	6E-05	13	27.00	95	150
LRR_6	Leucine Rich repeat	0.029	5	23.40	117	132
LRR_4	Leucine Rich repeats (2 copies)	5.2E-05	14	27.00	118	158
LRR_8	Leucine rich repeat	1.6E-05	15	27.00	119	178
LRR_1	Leucine Rich Repeat	0.016	6	20.60	119	132
LRR_4	Leucine Rich repeats (2 copies)	0.0058	7	27.00	146	184
LRR_8	Leucine rich repeat	0.00011	12	27.00	153	201
LRR_4	Leucine Rich repeats (2 copies)	0.0043	8	27.00	168	201
LRR_1	Leucine Rich Repeat	0.031	5	20.60	169	187
LRR_4	Leucine Rich repeats (2 copies)	0.3	2	27.00	192	220
LRR_8	Leucine rich repeat	2.4E-05	14	27.00	193	252
DUF5612	Domain of unknown function (DUF5612)	0.13	2	25.00	240	283
LRR_4	Leucine Rich repeats (2 copies)	5E-06	17	27.00	241	278
LRR_6	Leucine Rich repeat	0.0079	6	23.40	241	256
LRR_1	Leucine Rich Repeat	0.002	9	20.60	242	264
LRR_8	Leucine rich repeat	7.6E-09	25	27.00	242	301
LRR_8	Leucine rich repeat	1.1E-08	25	27.00	266	325
LRR_4	Leucine Rich repeats (2 copies)	0.00024	11	27.00	290	327
LRR_1	Leucine Rich Repeat	0.0023	9	20.60	290	312
LRR_6	Leucine Rich repeat	0.011	6	23.40	290	304
LRR_2	Leucine Rich Repeat	0.41	2	20.90	290	304
LRR_4	Leucine Rich repeats (2 copies)	0.05	4	27.00	315	349
LRR_8	Leucine rich repeat	2.9E-07	20	27.00	337	395
LRR_4	Leucine Rich repeats (2 copies)	0.00025	11	27.00	362	402
LRR_6	Leucine Rich repeat	0.053	4	23.40	362	375
LRR_1	Leucine Rich Repeat	0.00075	10	20.60	362	382
DUF5612	Domain of unknown function (DUF5612)	0.074	3	25.00	381	426
LRR_1	Leucine Rich Repeat	0.014	6	20.60	386	408
LRR_4	Leucine Rich repeats (2 copies)	0.0019	9	27.00	386	421
LRR_8	Leucine rich repeat	0.0012	9	27.00	410	466
LRR_4	Leucine Rich repeats (2 copies)	4.1E-06	17	27.00	461	496
LRR_1	Leucine Rich Repeat	0.072	4	20.60	461	479
DUF5612	Domain of unknown function (DUF5612)	0.25	1	25.00	475	523
LRR_8	Leucine rich repeat	6E-09	26	27.00	480	540
LRR_1	Leucine Rich Repeat	0.18	3	20.60	481	500
LRR_2	Leucine Rich Repeat	0.018	6	20.90	481	494
LRR_4	Leucine Rich repeats (2 copies)	0.094	3	27.00	514	540
LRR_6	Leucine Rich repeat	0.0045	7	23.40	527	543
LRR_8	Leucine rich repeat	1.2E-10	31	27.00	529	588
LRR_4	Leucine Rich repeats (2 copies)	5.1E-06	17	27.00	530	564
LRR_1	Leucine Rich Repeat	0.27	2	20.60	530	548
LRR_4	Leucine Rich repeats (2 copies)	1.3E-09	28	27.00	552	589
LRR_1	Leucine Rich Repeat	0.015	6	20.60	553	574
LRR_6	Leucine Rich repeat	0.038	4	23.40	554	566
LRR_6	Leucine Rich repeat	0.00011	12	23.40	576	590
LRR_1	Leucine Rich Repeat	0.019	6	20.60	577	593
DUF3098	Protein of unknown function (DUF3098)	0.0011	8	25.00	630	659
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	148	23.10	693	967
Pkinase	Protein kinase domain	0	145	20.40	693	965
DUF3098	Protein of unknown function (DUF3098)	0.29	1	25.00	726	757
Pkinase_fungal	Fungal protein kinase	4.3E-05	12	24.10	798	860
APH	Phosphotransferase enzyme family	6.6E-05	13	22.40	800	839
Qn_am_d_aIII	Quinohemoprotein amine dehydrogenase, alpha subunit domain III	0.00066	10	21.20	868	915