c2pfam

AT1G78980.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 2E-11 34 20.70 26 65
LRR_8 Leucine rich repeat 3.6E-05 13 27.00 69 104
LRR_4 Leucine Rich repeats (2 copies) 0.00029 11 27.00 70 104
LRR_6 Leucine Rich repeat 0.034 4 23.40 92 105
LRR_1 Leucine Rich Repeat 0.1 3 20.60 93 113
LRR_8 Leucine rich repeat 3E-06 17 27.00 114 150
LRR_4 Leucine Rich repeats (2 copies) 8.8E-06 16 27.00 115 151
LRR_5 BspA type Leucine rich repeat region (6 copies) 4.4E-05 13 27.70 132 217
LRR_6 Leucine Rich repeat 0.23 2 23.40 138 153
LRR_1 Leucine Rich Repeat 0.00046 10 20.60 139 161
LRR_8 Leucine rich repeat 8E-12 34 27.00 155 198
LRR_6 Leucine Rich repeat 0.0051 7 23.40 162 176
LRR_4 Leucine Rich repeats (2 copies) 2.4E-07 21 27.00 163 207
LRR_1 Leucine Rich Repeat 0.00093 10 20.60 163 185
LRR_6 Leucine Rich repeat 0.0041 7 23.40 185 201
LRR_1 Leucine Rich Repeat 0.15 3 20.60 187 202
LRR_2 Leucine Rich Repeat 0.00019 12 20.90 187 201
LRR_1 Leucine Rich Repeat 0.53 1 20.60 213 229
Pkinase Protein kinase domain 0 139 20.40 407 670
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 133 23.10 408 672
ABC1 ABC1 family 9.8E-05 12 20.60 410 433

699

LRRNT_2
LRR_8
LRR_4
LRR_6
LRR_1
LRR_8
LRR_4
LRR_5
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
LRR_2
LRR_1
Pkinase
PK_Tyr_Ser-Thr
ABC1

References:

LRR_8

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_5

LRR_4

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	2E-11	34	20.70	26	65
LRR_8	Leucine rich repeat	3.6E-05	13	27.00	69	104
LRR_4	Leucine Rich repeats (2 copies)	0.00029	11	27.00	70	104
LRR_6	Leucine Rich repeat	0.034	4	23.40	92	105
LRR_1	Leucine Rich Repeat	0.1	3	20.60	93	113
LRR_8	Leucine rich repeat	3E-06	17	27.00	114	150
LRR_4	Leucine Rich repeats (2 copies)	8.8E-06	16	27.00	115	151
LRR_5	BspA type Leucine rich repeat region (6 copies)	4.4E-05	13	27.70	132	217
LRR_6	Leucine Rich repeat	0.23	2	23.40	138	153
LRR_1	Leucine Rich Repeat	0.00046	10	20.60	139	161
LRR_8	Leucine rich repeat	8E-12	34	27.00	155	198
LRR_6	Leucine Rich repeat	0.0051	7	23.40	162	176
LRR_4	Leucine Rich repeats (2 copies)	2.4E-07	21	27.00	163	207
LRR_1	Leucine Rich Repeat	0.00093	10	20.60	163	185
LRR_6	Leucine Rich repeat	0.0041	7	23.40	185	201
LRR_1	Leucine Rich Repeat	0.15	3	20.60	187	202
LRR_2	Leucine Rich Repeat	0.00019	12	20.90	187	201
LRR_1	Leucine Rich Repeat	0.53	1	20.60	213	229
Pkinase	Protein kinase domain	0	139	20.40	407	670
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	133	23.10	408	672
ABC1	ABC1 family	9.8E-05	12	20.60	410	433