c2pfam

AT1G79950.1 :

Domain Description Evalue Bits GA Start End
ResIII Type III restriction enzyme, res subunit 8.8E-07 18 20.90 61 104
DEAD DEAD/DEAH box helicase 2E-05 13 20.60 72 184
SNF2_N SNF2 family N-terminal domain 3.6E-05 11 20.10 73 297
DEAD_2 DEAD_2 0 182 20.60 147 308
DEAD DEAD/DEAH box helicase 0.01 5 20.60 252 296
ResIII Type III restriction enzyme, res subunit 0.0067 5 20.90 280 296
Helicase_C_2 Helicase C-terminal domain 0 175 25.30 555 749
CCM2_C Cerebral cavernous malformation protein, harmonin-homology 2.1E-08 24 27.30 956 1027
PAH Paired amphipathic helix repeat 1.2E-06 18 21.30 968 1013

1040

ResIII
DEAD
SNF2_N
DEAD_2
DEAD
ResIII
Helicase_C_2
CCM2_C
PAH

References:

SNF2_N

DEAD_2
10915862 Nucleotide excision repair in yeast. Mutat Res 2000;451:13-24.

ResIII

DEAD
10322435 Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. Trends Biochem Sci 1999;24:192-198.
9862990 The DEAD box RNA helicase family in Arabidopsis thaliana. Nucleic Acids Res 1999;27:628-636.

PAH
2233725 The Saccharomyces cerevisiae SIN3 gene, a negative regulator of HO, contains four paired amphipathic helix motifs. Mol Cell Biol 1990;10:5927-5936.

Helicase_C_2

CCM2_C

Domain	Description	Evalue	Bits	GA	Start	End
ResIII	Type III restriction enzyme, res subunit	8.8E-07	18	20.90	61	104
DEAD	DEAD/DEAH box helicase	2E-05	13	20.60	72	184
SNF2_N	SNF2 family N-terminal domain	3.6E-05	11	20.10	73	297
DEAD_2	DEAD_2	0	182	20.60	147	308
DEAD	DEAD/DEAH box helicase	0.01	5	20.60	252	296
ResIII	Type III restriction enzyme, res subunit	0.0067	5	20.90	280	296
Helicase_C_2	Helicase C-terminal domain	0	175	25.30	555	749
CCM2_C	Cerebral cavernous malformation protein, harmonin-homology	2.1E-08	24	27.30	956	1027
PAH	Paired amphipathic helix repeat	1.2E-06	18	21.30	968	1013