AT1G80070.1 :

DomainDescriptionEvalueBitsGAStartEnd
PRO8NTPRO8NT (NUC069), PrP8 N-terminal domain028425.0082233
PROCNPROCN (NUC071) domain078119.80419824
RRM_4RNA recognition motif of the spliceosomal PrP8015520.6010091099
U5_2-snRNA_bdgU5-snRNA binding site 2 of PrP8023920.7012341367
JABJAB1/Mov34/MPN/PAD-1 ubiquitin protease0.66-122.5012421285
U6-snRNA_bdgU6-snRNA interacting domain of PrP8029929.8014661624
U6-snRNA_bdgU6-snRNA interacting domain of PrP80.13129.8016531678
PRP8_domainIVPRP8 domain IV core043325.0017842013
JABJAB1/Mov34/MPN/PAD-1 ubiquitin protease1.1E-092722.5021262222
PROCTPROCT (NUC072) domain016819.5022362356

 2359

PRO8NT
PROCN
RRM_4
U5_2-snRNA_bdg
JAB
U6-snRNA_bdg
U6-snRNA_bdg
PRP8_domainIV
JAB
PROCT


References:

U6-snRNA_bdg
16431982 Dissection of Prp8 protein defines multiple interactions with crucial RNA sequences in the catalytic core of the spliceosome. RNA. 2006;12:375-386.

U5_2-snRNA_bdg
15840809 Prp8 protein: at the heart of the spliceosome. RNA. 2005;11:533-557.
16431982 Dissection of Prp8 protein defines multiple interactions with crucial RNA sequences in the catalytic core of the spliceosome. RNA. 2006;12:375-386.

PROCT
15112237 Insights into the evolution of the nucleolus by an analysis of its protein domain repertoire. Bioessays 2004;26:567-581.

PROCN
15112237 Insights into the evolution of the nucleolus by an analysis of its protein domain repertoire. Bioessays 2004;26:567-581.

PRO8NT
15112237 Insights into the evolution of the nucleolus by an analysis of its protein domain repertoire. Bioessays 2004;26:567-581.
15840809 Prp8 protein: at the heart of the spliceosome. RNA. 2005;11:533-557.
16373487 Prp8p dissection reveals domain structure and protein interaction sites. RNA. 2006;12:198-205.
16431982 Dissection of Prp8 protein defines multiple interactions with crucial RNA sequences in the catalytic core of the spliceosome. RNA. 2006;12:375-386.

JAB

RRM_4
15840809 Prp8 protein: at the heart of the spliceosome. RNA. 2005;11:533-557.
16431982 Dissection of Prp8 protein defines multiple interactions with crucial RNA sequences in the catalytic core of the spliceosome. RNA. 2006;12:375-386.

PRP8_domainIV
18836455 Structural elucidation of a PRP8 core domain from the heart of the spliceosome. Nat Struct Mol Biol. 2008;15:1199-1205.