c2pfam

AT1G80410.1 :

Domain Description Evalue Bits GA Start End
NARP1 NMDA receptor-regulated protein 1 0.22 1 21.80 9 67
TPR_6 Tetratricopeptide repeat 0.055 5 26.30 19 41
Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat 0.0075 7 25.30 19 49
TPR_19 Tetratricopeptide repeat 0.67 1 25.00 20 42
TPR_2 Tetratricopeptide repeat 0.2 3 22.40 20 42
TPR_16 Tetratricopeptide repeat 0.13 4 32.70 22 44
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.00097 10 27.20 22 102
TPR_14 Tetratricopeptide repeat 0.16 4 23.50 23 46
PPTA Protein prenyltransferase alpha subunit repeat 0.59 1 20.20 61 86
TPR_17 Tetratricopeptide repeat 0.12 4 24.40 72 98
TPR_15 Tetratricopeptide repeat 0.0006 10 26.20 75 113
TPR_12 Tetratricopeptide repeat 0.00073 10 30.10 79 107
TPR_2 Tetratricopeptide repeat 1.9E-09 28 22.40 79 110
TPR_1 Tetratricopeptide repeat 1.8E-10 31 20.40 79 110
TPR_7 Tetratricopeptide repeat 8.7E-08 23 27.90 79 110
TPR_8 Tetratricopeptide repeat 5.7E-08 23 25.70 80 110
TPR_14 Tetratricopeptide repeat 1.8E-06 19 23.50 80 117
TPR_12 Tetratricopeptide repeat 0.00043 11 30.10 82 117
TPR_10 Tetratricopeptide repeat 0.0022 9 27.50 82 106
TPR_16 Tetratricopeptide repeat 4.3E-05 15 32.70 83 124
TPR_6 Tetratricopeptide repeat 0.008 8 26.30 83 109
TPR_11 TPR repeat 2.5E-09 27 26.80 84 123
TPR_9 Tetratricopeptide repeat 8.3E-06 17 35.00 86 129
MAS20 MAS20 protein import receptor 0.53 1 21.50 89 114
Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat 0.0062 7 25.30 91 114
TPR_19 Tetratricopeptide repeat 5.6E-05 14 25.00 91 143
PPTA Protein prenyltransferase alpha subunit repeat 0.26 2 20.20 93 110
TPR_17 Tetratricopeptide repeat 0.028 6 24.40 99 122
TPR_19 Tetratricopeptide repeat 0.8 1 25.00 181 212
NARP1 NMDA receptor-regulated protein 1 0 680 21.80 186 693
TPR_14 Tetratricopeptide repeat 0.62 2 23.50 195 213
TPR_6 Tetratricopeptide repeat 0.18 3 26.30 224 255
TPR_8 Tetratricopeptide repeat 0.064 4 25.70 231 256
TPR_14 Tetratricopeptide repeat 0.033 6 23.50 231 263
TPR_19 Tetratricopeptide repeat 0.0047 8 25.00 232 265
TPR_10 Tetratricopeptide repeat 0.39 1 27.50 232 247
TPR_16 Tetratricopeptide repeat 0.031 6 32.70 234 263
TPR_2 Tetratricopeptide repeat 0.0057 8 22.40 235 256
Fis1_TPR_C Fis1 C-terminal tetratricopeptide repeat 0.052 4 25.30 235 257
TPR_11 TPR repeat 0.027 5 26.80 237 263
PPTA Protein prenyltransferase alpha subunit repeat 0.054 4 20.20 240 257
TPR_12 Tetratricopeptide repeat 0.0022 9 30.10 379 408
TPR_4 Tetratricopeptide repeat 0.04 6 22.00 381 397
TPR_7 Tetratricopeptide repeat 0.078 4 27.90 382 399
TPR_2 Tetratricopeptide repeat 0.0054 8 22.40 383 412
TPR_14 Tetratricopeptide repeat 0.46 2 23.50 383 412
TPR_15 Tetratricopeptide repeat 0.23 1 26.20 383 412
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.094 4 27.20 383 406
TPR_16 Tetratricopeptide repeat 0.0061 8 32.70 386 442
TPR_9 Tetratricopeptide repeat 0.24 2 35.00 390 423
TPR_19 Tetratricopeptide repeat 0.39 2 25.00 404 440
TPR_17 Tetratricopeptide repeat 0.33 2 24.40 405 433
CD225 Interferon-induced transmembrane protein 0.00016 12 20.60 417 443
TPR_14 Tetratricopeptide repeat 0.52 2 23.50 422 440
TPR_4 Tetratricopeptide repeat 0.27 3 22.00 426 439
TPR_14 Tetratricopeptide repeat 0.09 5 23.50 491 522
TPR_4 Tetratricopeptide repeat 0.45 2 22.00 493 510
TPR_12 Tetratricopeptide repeat 0.89 1 30.10 495 513
TPR_16 Tetratricopeptide repeat 0.0049 8 32.70 495 520
TPR_7 Tetratricopeptide repeat 0.68 1 27.90 496 513
TPR_6 Tetratricopeptide repeat 0.13 4 26.30 497 520
TPR_1 Tetratricopeptide repeat 0.51 1 20.40 497 511
TPR_11 TPR repeat 0.035 4 26.80 497 514
TPR_2 Tetratricopeptide repeat 0.0026 9 22.40 497 516
ANAPC3 Anaphase-promoting complex, cyclosome, subunit 3 0.85 1 27.20 497 513
MAS20 MAS20 protein import receptor 0.018 6 21.50 589 629

897

NARP1
TPR_6
Fis1_TPR_C
TPR_19
TPR_2
TPR_16
ANAPC3
TPR_14
PPTA
TPR_17
TPR_15
TPR_12
TPR_2
TPR_1
TPR_7
TPR_8
TPR_14
TPR_12
TPR_10
TPR_16
TPR_6
TPR_11
TPR_9
MAS20
Fis1_TPR_C
TPR_19
PPTA
TPR_17
TPR_19
NARP1
TPR_14
TPR_6
TPR_8
TPR_14
TPR_19
TPR_10
TPR_16
TPR_2
Fis1_TPR_C
TPR_11
PPTA
TPR_12
TPR_4
TPR_7
TPR_2
TPR_14
TPR_15
ANAPC3
TPR_16
TPR_9
TPR_19
TPR_17
CD225
TPR_14
TPR_4
TPR_14
TPR_4
TPR_12
TPR_16
TPR_7
TPR_6
TPR_1
TPR_11
TPR_2
ANAPC3
MAS20

References:

TPR_7

TPR_6

TPR_4

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_19

TPR_17

TPR_16

TPR_15

TPR_14

TPR_12

TPR_11

TPR_10

NARP1
11297529 N-methyl-D-aspartate receptors regulate a group of transiently expressed genes in the developing brain. J Biol Chem. 2001;276:14257-14263.

ANAPC3

CD225
7559564 Expression cloning of an interferon-inducible 17-kDa membrane protein implicated in the control of cell growth. J Biol Chem 1995;270:23860-23866.

MAS20

PPTA
9843427 Crystal structure of farnesyl protein transferase complexed with a CaaX peptide and farnesyl diphosphate analogue. Biochemistry 1998;37:16601-16611.
12702202 Protein prenyltransferases. Genome Biol 2003;4:212.

Fis1_TPR_C

TPR_9

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
NARP1	NMDA receptor-regulated protein 1	0.22	1	21.80	9	67
TPR_6	Tetratricopeptide repeat	0.055	5	26.30	19	41
Fis1_TPR_C	Fis1 C-terminal tetratricopeptide repeat	0.0075	7	25.30	19	49
TPR_19	Tetratricopeptide repeat	0.67	1	25.00	20	42
TPR_2	Tetratricopeptide repeat	0.2	3	22.40	20	42
TPR_16	Tetratricopeptide repeat	0.13	4	32.70	22	44
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.00097	10	27.20	22	102
TPR_14	Tetratricopeptide repeat	0.16	4	23.50	23	46
PPTA	Protein prenyltransferase alpha subunit repeat	0.59	1	20.20	61	86
TPR_17	Tetratricopeptide repeat	0.12	4	24.40	72	98
TPR_15	Tetratricopeptide repeat	0.0006	10	26.20	75	113
TPR_12	Tetratricopeptide repeat	0.00073	10	30.10	79	107
TPR_2	Tetratricopeptide repeat	1.9E-09	28	22.40	79	110
TPR_1	Tetratricopeptide repeat	1.8E-10	31	20.40	79	110
TPR_7	Tetratricopeptide repeat	8.7E-08	23	27.90	79	110
TPR_8	Tetratricopeptide repeat	5.7E-08	23	25.70	80	110
TPR_14	Tetratricopeptide repeat	1.8E-06	19	23.50	80	117
TPR_12	Tetratricopeptide repeat	0.00043	11	30.10	82	117
TPR_10	Tetratricopeptide repeat	0.0022	9	27.50	82	106
TPR_16	Tetratricopeptide repeat	4.3E-05	15	32.70	83	124
TPR_6	Tetratricopeptide repeat	0.008	8	26.30	83	109
TPR_11	TPR repeat	2.5E-09	27	26.80	84	123
TPR_9	Tetratricopeptide repeat	8.3E-06	17	35.00	86	129
MAS20	MAS20 protein import receptor	0.53	1	21.50	89	114
Fis1_TPR_C	Fis1 C-terminal tetratricopeptide repeat	0.0062	7	25.30	91	114
TPR_19	Tetratricopeptide repeat	5.6E-05	14	25.00	91	143
PPTA	Protein prenyltransferase alpha subunit repeat	0.26	2	20.20	93	110
TPR_17	Tetratricopeptide repeat	0.028	6	24.40	99	122
TPR_19	Tetratricopeptide repeat	0.8	1	25.00	181	212
NARP1	NMDA receptor-regulated protein 1	0	680	21.80	186	693
TPR_14	Tetratricopeptide repeat	0.62	2	23.50	195	213
TPR_6	Tetratricopeptide repeat	0.18	3	26.30	224	255
TPR_8	Tetratricopeptide repeat	0.064	4	25.70	231	256
TPR_14	Tetratricopeptide repeat	0.033	6	23.50	231	263
TPR_19	Tetratricopeptide repeat	0.0047	8	25.00	232	265
TPR_10	Tetratricopeptide repeat	0.39	1	27.50	232	247
TPR_16	Tetratricopeptide repeat	0.031	6	32.70	234	263
TPR_2	Tetratricopeptide repeat	0.0057	8	22.40	235	256
Fis1_TPR_C	Fis1 C-terminal tetratricopeptide repeat	0.052	4	25.30	235	257
TPR_11	TPR repeat	0.027	5	26.80	237	263
PPTA	Protein prenyltransferase alpha subunit repeat	0.054	4	20.20	240	257
TPR_12	Tetratricopeptide repeat	0.0022	9	30.10	379	408
TPR_4	Tetratricopeptide repeat	0.04	6	22.00	381	397
TPR_7	Tetratricopeptide repeat	0.078	4	27.90	382	399
TPR_2	Tetratricopeptide repeat	0.0054	8	22.40	383	412
TPR_14	Tetratricopeptide repeat	0.46	2	23.50	383	412
TPR_15	Tetratricopeptide repeat	0.23	1	26.20	383	412
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.094	4	27.20	383	406
TPR_16	Tetratricopeptide repeat	0.0061	8	32.70	386	442
TPR_9	Tetratricopeptide repeat	0.24	2	35.00	390	423
TPR_19	Tetratricopeptide repeat	0.39	2	25.00	404	440
TPR_17	Tetratricopeptide repeat	0.33	2	24.40	405	433
CD225	Interferon-induced transmembrane protein	0.00016	12	20.60	417	443
TPR_14	Tetratricopeptide repeat	0.52	2	23.50	422	440
TPR_4	Tetratricopeptide repeat	0.27	3	22.00	426	439
TPR_14	Tetratricopeptide repeat	0.09	5	23.50	491	522
TPR_4	Tetratricopeptide repeat	0.45	2	22.00	493	510
TPR_12	Tetratricopeptide repeat	0.89	1	30.10	495	513
TPR_16	Tetratricopeptide repeat	0.0049	8	32.70	495	520
TPR_7	Tetratricopeptide repeat	0.68	1	27.90	496	513
TPR_6	Tetratricopeptide repeat	0.13	4	26.30	497	520
TPR_1	Tetratricopeptide repeat	0.51	1	20.40	497	511
TPR_11	TPR repeat	0.035	4	26.80	497	514
TPR_2	Tetratricopeptide repeat	0.0026	9	22.40	497	516
ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	0.85	1	27.20	497	513
MAS20	MAS20 protein import receptor	0.018	6	21.50	589	629