c2pfam

AT1G80820.1 :

Domain Description Evalue Bits GA Start End
adh_short short chain dehydrogenase 5.3E-06 15 20.50 6 76
Polysacc_synt_2 Polysaccharide biosynthesis protein 2E-08 23 20.20 8 126
Epimerase NAD dependent epimerase/dehydratase family 2.2E-28 89 20.60 8 239
NmrA NmrA-like family 2.5E-15 46 20.60 8 124
KR KR domain 4E-08 23 22.60 9 131
Sacchrp_dh_NADP Saccharopine dehydrogenase NADP binding domain 4.8E-05 13 25.10 9 129
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 5.3E-15 45 27.00 10 243
NAD_binding_4 Male sterility protein 1.7E-11 33 20.10 10 202
3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 1.5E-21 66 20.00 10 233
NAD_binding_10 NAD(P)H-binding 1.8E-20 63 27.20 12 131
adh_short short chain dehydrogenase 0.12 1 20.50 93 130

332

adh_short
Polysacc_synt_2
Epimerase
NmrA
KR
Sacchrp_dh_NADP
GDP_Man_Dehyd
NAD_binding_4
3Beta_HSD
NAD_binding_10
adh_short

References:

KR

Sacchrp_dh_NADP

adh_short
9735295 The refined crystal structure of Drosophila lebanonensis alcohol dehydrogenase at 1.9 A resolution. J Mol Biol 1998;282:383-399.
10387002 Structure of tropinone reductase-II complexed with NADP+ and pseudotropine at 1.9 A resolution: implication for stereospecific substrate binding and catalysis. Biochemistry 1999;38:7630-7637.

GDP_Man_Dehyd

Polysacc_synt_2
7961465 Sequence analysis and molecular characterization of genes required for the biosynthesis of type 1 capsular polysaccharide in Staphylococcus aureus. J Bacteriol 1994;176:7005-7016.
9079898 Identification of additional genes required for O-antigen biosynthesis in Vibrio cholerae O1. J Bacteriol 1997;179:2147-2153.

Epimerase
9174344 Structural analysis of UDP-sugar binding to UDP-galactose 4-epimerase from Escherichia coli. Biochemistry 1997;36:6294-6304.

3Beta_HSD
1562516 Structure and tissue-specific expression of 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase genes in human and rat classical and peripheral steroidogenic tissues. J Steroid Biochem Mol Biol 1992;41:421-435.

NmrA
11726498 The structure of the negative transcriptional regulator NmrA reveals a structural superfamily which includes the short-chain dehydrogenase/reductases. EMBO J 2001;20:6619-6626.

NAD_binding_10

NAD_binding_4
9351246 The Arabidopsis MALE STERILITY 2 protein shares similarity with reductases in elongation/condensation complexes. Plant J 1997;12:615-623.

Domain	Description	Evalue	Bits	GA	Start	End
adh_short	short chain dehydrogenase	5.3E-06	15	20.50	6	76
Polysacc_synt_2	Polysaccharide biosynthesis protein	2E-08	23	20.20	8	126
Epimerase	NAD dependent epimerase/dehydratase family	2.2E-28	89	20.60	8	239
NmrA	NmrA-like family	2.5E-15	46	20.60	8	124
KR	KR domain	4E-08	23	22.60	9	131
Sacchrp_dh_NADP	Saccharopine dehydrogenase NADP binding domain	4.8E-05	13	25.10	9	129
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	5.3E-15	45	27.00	10	243
NAD_binding_4	Male sterility protein	1.7E-11	33	20.10	10	202
3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	1.5E-21	66	20.00	10	233
NAD_binding_10	NAD(P)H-binding	1.8E-20	63	27.20	12	131
adh_short	short chain dehydrogenase	0.12	1	20.50	93	130