AT1G19290.1 :

DomainDescriptionEvalueBitsGAStartEnd
PPR_longPentacotripeptide-repeat region of PRORP2.3E-051427.0087240
TPR_8Tetratricopeptide repeat0.18325.70105133
AEP1ATPase expression protein 10.0013827.00150203
PPR_3Pentatricopeptide repeat domain0.000961025.00157199
PPR_2PPR repeat family 0.000631130.00158189
PPR_1PPR repeat0.025523.80159181
PPRPPR repeat0.0043825.00160185
MRP-S27Mitochondrial 28S ribosomal protein S270.069325.90164217
PPR_longPentacotripeptide-repeat region of PRORP7.3E-071927.00170278
PPR_3Pentatricopeptide repeat domain3.4E-051525.00177235
PPR_2PPR repeat family 1.2E-103230.00189237
PPRPPR repeat0.0019925.00192219
MRP-S27Mitochondrial 28S ribosomal protein S270.025425.90196250
PPR_3Pentatricopeptide repeat domain0.083425.00214245
PPR_1PPR repeat2.9E-092723.80221247
ATP13Mitochondrial ATPase expression0.11326.70223269
PPRPPR repeat1.9E-051625.00226245
TPR_7Tetratricopeptide repeat0.82127.90233244
TPR_10Tetratricopeptide repeat0.73127.50233250
PPR_3Pentatricopeptide repeat domain5.8E-082325.00255292
PPR_1PPR repeat1.8E-082523.80256287
PPR_2PPR repeat family 1.1E-165230.00260308
PPRPPR repeat9.5E-092625.00262292
PPR_longPentacotripeptide-repeat region of PRORP2.5E-082427.00280375
PPR_3Pentatricopeptide repeat domain2E-092825.00282328
PPR_1PPR repeat3E-144323.80290320
PPR_2PPR repeat family 2.9E-154730.00294343
Fer2_2[2Fe-2S] binding domain0.051420.90294349
PPRPPR repeat6.2E-123625.00297326
MRP-S27Mitochondrial 28S ribosomal protein S270.0096525.90301357
ADKAdenylate kinase0.0019920.60302364
ATP13Mitochondrial ATPase expression0.74026.70327359
PPR_1PPR repeat3.3E-072123.80327357
PPR_2PPR repeat family 7.1E-072030.00330365
PPRPPR repeat2E-082525.00333362
BTADBacterial transcriptional activator domain0.038521.00333358
FluMu_NMu-like prophage FluMu N-terminal domain0.49125.80338345
Fer2_2[2Fe-2S] binding domain0.31220.90339355
PPR_3Pentatricopeptide repeat domain3.7E-092725.00353408
Peptidase_C30Coronavirus endopeptidase C301.5E-051525.00356448
TPR_19Tetratricopeptide repeat0.11425.00365395
PPR_2PPR repeat family 6.7E-195930.00365413
PPRPPR repeat5.4E-103025.00368393
PPR_1PPR repeat2.7E-092723.80370392
ADKAdenylate kinase0.0044820.60371423
Fer2_2[2Fe-2S] binding domain0.0081720.90374415
TPR_19Tetratricopeptide repeat0.013725.00379426
PPR_longPentacotripeptide-repeat region of PRORP1E-092927.00381489
AEP1ATPase expression protein 10.45027.00383434
PPR_3Pentatricopeptide repeat domain6.1E-123625.00388446
ATP13Mitochondrial ATPase expression0.003826.70391429
PPR_1PPR repeat1.6E-175423.80396427
MRP-S27Mitochondrial 28S ribosomal protein S270.0023725.90399435
PPR_2PPR repeat family 5.1E-175330.00402447
PPRPPR repeat2E-113425.00403430
TPR_7Tetratricopeptide repeat0.028527.90403426
TPR_10Tetratricopeptide repeat0.031527.50403426
FluMu_NMu-like prophage FluMu N-terminal domain0.0026825.80405415
TPR_14Tetratricopeptide repeat0.066523.50406431
SPOB_aSensor_kinase_SpoOB-type, alpha-helical domain0.21228.10407429
TPR_2Tetratricopeptide repeat0.44222.40411427
PPR_1PPR repeat2E-051523.80431450
PPR_2PPR repeat family 2.1E-123830.00434483
PPRPPR repeat2.4E-082525.00438467
MRP-S27Mitochondrial 28S ribosomal protein S270.0036725.90444519
PPR_3Pentatricopeptide repeat domain0.0015925.00461514
PPR_1PPR repeat0.000451123.80465495
BTADBacterial transcriptional activator domain0.1421.00467497
PPR_2PPR repeat family 1.4E-113530.00470518
PPRPPR repeat4.4E-051425.00473501
TPR_8Tetratricopeptide repeat0.038525.70476492
TPR_14Tetratricopeptide repeat0.0086823.50477501
TPR_19Tetratricopeptide repeat0.087425.00477493
TPR_7Tetratricopeptide repeat0.69127.90479498
TPR_16Tetratricopeptide repeat0.026632.70479501
TPR_1Tetratricopeptide repeat0.0029820.40480499
TPR_6Tetratricopeptide repeat0.071526.30480499
TPR_2Tetratricopeptide repeat0.00141022.40480499
TPR_10Tetratricopeptide repeat0.024527.50480500
PPR_longPentacotripeptide-repeat region of PRORP1.9E-061827.00490583
PPR_3Pentatricopeptide repeat domain3.2E-051525.00493547
PPR_1PPR repeat3.4E-092723.80500530
PPR_2PPR repeat family 6.1E-092730.00505552
PPRPPR repeat2.6E-061825.00507530
SPOB_aSensor_kinase_SpoOB-type, alpha-helical domain0.015628.10513532
PPR_3Pentatricopeptide repeat domain1.9E-123825.00528584
PPR_1PPR repeat3.4E-061723.80537568
PPR_2PPR repeat family 5.8E-072030.00539575
PPRPPR repeat2.5E-051525.00543572
TPR_10Tetratricopeptide repeat0.15327.50543562
TPR_2Tetratricopeptide repeat0.19322.40543560
PPR_1PPR repeat0.00031123.80570585
PPR_2PPR repeat family 2.2E-103130.00574623
PPRPPR repeat0.000991025.00578607
PPR_longPentacotripeptide-repeat region of PRORP6.2E-051327.00581644
PPR_3Pentatricopeptide repeat domain0.000331125.00599645
PPR_1PPR repeat8.7E-092623.80605633
PPR_2PPR repeat family 1.6E-061930.00609646
Fer2_2[2Fe-2S] binding domain0.19320.90611634
PPRPPR repeat9.7E-072025.00613642
SPOB_aSensor_kinase_SpoOB-type, alpha-helical domain0.22228.10617639
TPR_2Tetratricopeptide repeat0.012722.40648673
TPR_8Tetratricopeptide repeat0.42225.70648673
TPR_1Tetratricopeptide repeat0.53120.40649665
TPR_10Tetratricopeptide repeat0.71127.50650673
TPR_6Tetratricopeptide repeat0.046526.30651673
PPRPPR repeat0.47225.00654674
PPR_3Pentatricopeptide repeat domain0.36225.00697726
PPR_1PPR repeat3.1E-103023.80715743
PPR_2PPR repeat family 1E-154830.00717766
PPRPPR repeat1.1E-072325.00721747
AEP1ATPase expression protein 10.25127.00729755
TPR_2Tetratricopeptide repeat0.18322.40730747
TPR_19Tetratricopeptide repeat0.31225.00730749
TPR_14Tetratricopeptide repeat0.28323.50731747
TPR_16Tetratricopeptide repeat0.14432.70731749
PPR_longPentacotripeptide-repeat region of PRORP4.3E-123627.00732850
PPR_3Pentatricopeptide repeat domain1.8E-123825.00751798
PPR_1PPR repeat1.6E-103123.80753781
PPRPPR repeat5.2E-082425.00756786
PPR_2PPR repeat family 3.1E-113430.00769802
PPR_1PPR repeat6E-154523.80784815
PPR_2PPR repeat family 2.9E-196030.00788837
PPRPPR repeat6.9E-102925.00791821
MRP-S27Mitochondrial 28S ribosomal protein S272E-072125.90792854
AEP1ATPase expression protein 10.4027.00792838
TPR_14Tetratricopeptide repeat0.41323.50795818
SPOB_aSensor_kinase_SpoOB-type, alpha-helical domain0.021528.10796816
TPR_19Tetratricopeptide repeat0.065525.00800818
PPR_3Pentatricopeptide repeat domain3.5E-082425.00811856
PPR_1PPR repeat4.5E-144323.80819851
PPR_2PPR repeat family 1.4E-103230.00823856
PPRPPR repeat1.7E-103125.00826856

 904

PPR_long
TPR_8
AEP1
PPR_3
PPR_2
PPR_1
PPR
MRP-S27
PPR_long
PPR_3
PPR_2
PPR
MRP-S27
PPR_3
PPR_1
ATP13
PPR
TPR_7
TPR_10
PPR_3
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_1
PPR_2
Fer2_2
PPR
MRP-S27
ADK
ATP13
PPR_1
PPR_2
PPR
BTAD
FluMu_N
Fer2_2
PPR_3
Peptidase_C30
TPR_19
PPR_2
PPR
PPR_1
ADK
Fer2_2
TPR_19
PPR_long
AEP1
PPR_3
ATP13
PPR_1
MRP-S27
PPR_2
PPR
TPR_7
TPR_10
FluMu_N
TPR_14
SPOB_a
TPR_2
PPR_1
PPR_2
PPR
MRP-S27
PPR_3
PPR_1
BTAD
PPR_2
PPR
TPR_8
TPR_14
TPR_19
TPR_7
TPR_16
TPR_1
TPR_6
TPR_2
TPR_10
PPR_long
PPR_3
PPR_1
PPR_2
PPR
SPOB_a
PPR_3
PPR_1
PPR_2
PPR
TPR_10
TPR_2
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_1
PPR_2
Fer2_2
PPR
SPOB_a
TPR_2
TPR_8
TPR_1
TPR_10
TPR_6
PPR
PPR_3
PPR_1
PPR_2
PPR
AEP1
TPR_2
TPR_19
TPR_14
TPR_16
PPR_long
PPR_3
PPR_1
PPR
PPR_2
PPR_1
PPR_2
PPR
MRP-S27
AEP1
TPR_14
SPOB_a
TPR_19
PPR_3
PPR_1
PPR_2
PPR


References:

AEP1

ADK
9715904 Crystal structures of Bacillus stearothermophilus adenylate kinase with bound Ap5A, Mg2+ Ap5A, and Mn2+ Ap5A reveal an intermediate lid position and six coordinate octahedral geometry for bound Mg2+ and Mn2+. Proteins 1998;32:276-288.

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

FluMu_N

TPR_14

TPR_1
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_19

MRP-S27
11344316 Identification of four proteins from the small subunit of the mammalian mitochondrial ribosome using a proteomics approach. Protein Sci. 2001;10:471-481.

PPR_long

PPR_3

PPR_2

PPR_1

TPR_10

TPR_16

Fer2_2
7502041 Crystal structure of the xanthine oxidase-related aldehyde oxido-reductase from D. gigas. Science 1995;270:1170-1176.

ATP13

BTAD
12625841 New Knowledge from Old: In silico discovery of novel protein domains in Streptomyces coelicolor. BMC Microbiol 2003;3:3-3.

TPR_6

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

SPOB_a

Peptidase_C30
12093723 Structure of coronavirus main proteinase reveals combination of a chymotrypsin fold with an extra alpha-helical domain. EMBO J 2002;21:3213-3224.
10725411 Virus-encoded proteinases and proteolytic processing in the Nidovirales. J Gen Virol 2000;81:853-879.
11842254 Conservation of substrate specificities among coronavirus main proteases. J Gen Virol 2002;83:595-599.

TPR_7

TPR_8