c2pfam

AT2G01950.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.4E-13 40 20.70 37 75
LRR_8 Leucine rich repeat 0.0011 8 27.00 80 113
LRR_4 Leucine Rich repeats (2 copies) 0.00089 9 27.00 80 116
LRR_5 BspA type Leucine rich repeat region (6 copies) 2.4E-05 14 27.70 93 186
LRR_6 Leucine Rich repeat 0.1 3 23.40 128 141
LRR_8 Leucine rich repeat 2E-10 30 27.00 128 189
LRR_4 Leucine Rich repeats (2 copies) 0.034 4 27.00 129 168
LRR_1 Leucine Rich Repeat 0.1 3 20.60 129 147
LRR_1 Leucine Rich Repeat 0.022 5 20.60 153 172
LRR_4 Leucine Rich repeats (2 copies) 1.3E-05 15 27.00 153 196
LRR_6 Leucine Rich repeat 4.5E-05 13 23.40 176 191
LRR_4 Leucine Rich repeats (2 copies) 1.1E-07 22 27.00 177 218
LRR_1 Leucine Rich Repeat 0.0019 9 20.60 178 194
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.023 4 27.70 202 238
LRR_6 Leucine Rich repeat 0.013 5 23.40 203 217
LRR_4 Leucine Rich repeats (2 copies) 3.3E-07 20 27.00 206 241
LRR_8 Leucine rich repeat 1.9E-12 36 27.00 206 264
LRR_1 Leucine Rich Repeat 0.057 4 20.60 207 227
LRR_6 Leucine Rich repeat 7.7E-05 12 23.40 226 242
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.0018 8 27.70 226 312
LRR_4 Leucine Rich repeats (2 copies) 7.2E-07 19 27.00 228 265
LRR_1 Leucine Rich Repeat 4.1E-05 14 20.60 229 251
LRRNT_2 Leucine rich repeat N-terminal domain 0.19 2 20.70 251 292
LRR_6 Leucine Rich repeat 0.0041 7 23.40 254 265
LRR_1 Leucine Rich Repeat 0.0019 8 20.60 254 272
LRR_4 Leucine Rich repeats (2 copies) 1.3E-06 18 27.00 254 289
LRR_6 Leucine Rich repeat 0.012 5 23.40 276 292
LRR_8 Leucine rich repeat 8.8E-11 31 27.00 277 338
LRR_4 Leucine Rich repeats (2 copies) 2.8E-07 20 27.00 278 314
LRR_1 Leucine Rich Repeat 0.0022 8 20.60 278 300
LRR_6 Leucine Rich repeat 6.4E-05 12 23.40 299 315
LRR_1 Leucine Rich Repeat 0.00071 10 20.60 303 321
LRR_1 Leucine Rich Repeat 0.13 3 20.60 327 349
LRR_4 Leucine Rich repeats (2 copies) 0.00032 11 27.00 327 354
LRR_8 Leucine rich repeat 2.9E-07 20 27.00 327 386
LRR_1 Leucine Rich Repeat 0.69 1 20.60 352 371
LRR_1 Leucine Rich Repeat 0.45 1 20.60 376 398
LRR_8 Leucine rich repeat 1.1E-05 15 27.00 376 434
LRR_4 Leucine Rich repeats (2 copies) 1.2E-05 15 27.00 376 415
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.49 0 27.70 376 407
LRR_6 Leucine Rich repeat 0.6 0 23.40 398 409
LRR_1 Leucine Rich Repeat 0.04 4 20.60 401 422
LRR_4 Leucine Rich repeats (2 copies) 6.8E-05 13 27.00 424 460
LRR_8 Leucine rich repeat 5.2E-06 16 27.00 433 483
LRR_6 Leucine Rich repeat 0.047 4 23.40 446 462
LRR_4 Leucine Rich repeats (2 copies) 7.7E-05 13 27.00 447 474
LRR_8 Leucine rich repeat 2.7E-08 23 27.00 448 507
LRR_1 Leucine Rich Repeat 0.0043 7 20.60 448 470
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.076 2 27.70 448 481
LRR_8 Leucine rich repeat 1.2E-06 18 27.00 473 531
LRR_4 Leucine Rich repeats (2 copies) 0.00026 11 27.00 496 533
LRR_1 Leucine Rich Repeat 0.074 4 20.60 497 518
LRR_6 Leucine Rich repeat 0.84 0 23.40 497 510
LRR_6 Leucine Rich repeat 0.26 1 23.40 517 534
LRR_1 Leucine Rich Repeat 0.62 1 20.60 521 537
LRR_8 Leucine rich repeat 1.6E-08 24 27.00 606 647
LRR_6 Leucine Rich repeat 0.0026 7 23.40 611 625
LRR_4 Leucine Rich repeats (2 copies) 3.6E-07 20 27.00 613 647
LRR_1 Leucine Rich Repeat 0.0047 7 20.60 613 631
LRR_1 Leucine Rich Repeat 0.013 6 20.60 637 655
LRR_6 Leucine Rich repeat 0.01 6 23.40 637 650
LRR_8 Leucine rich repeat 2.4E-06 17 27.00 656 695
LRR_4 Leucine Rich repeats (2 copies) 3.7E-05 14 27.00 659 697
LRR_6 Leucine Rich repeat 0.42 1 23.40 684 697
LRR_1 Leucine Rich Repeat 0.24 2 20.60 687 700
Pkinase Protein kinase domain 0 146 20.40 841 1050
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 138 23.10 841 1045
APH Phosphotransferase enzyme family 0.3 0 22.40 867 924
APH Phosphotransferase enzyme family 0.00074 9 22.40 961 991

1143

LRRNT_2
LRR_8
LRR_4
LRR_5
LRR_6
LRR_8
LRR_4
LRR_1
LRR_1
LRR_4
LRR_6
LRR_4
LRR_1
LRR_5
LRR_6
LRR_4
LRR_8
LRR_1
LRR_6
LRR_5
LRR_4
LRR_1
LRRNT_2
LRR_6
LRR_1
LRR_4
LRR_6
LRR_8
LRR_4
LRR_1
LRR_6
LRR_1
LRR_1
LRR_4
LRR_8
LRR_1
LRR_1
LRR_8
LRR_4
LRR_5
LRR_6
LRR_1
LRR_4
LRR_8
LRR_6
LRR_4
LRR_8
LRR_1
LRR_5
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_1
LRR_6
LRR_8
LRR_4
LRR_6
LRR_1
Pkinase
PK_Tyr_Ser-Thr
APH
APH

References:

LRR_8

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_5

LRR_4

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.4E-13	40	20.70	37	75
LRR_8	Leucine rich repeat	0.0011	8	27.00	80	113
LRR_4	Leucine Rich repeats (2 copies)	0.00089	9	27.00	80	116
LRR_5	BspA type Leucine rich repeat region (6 copies)	2.4E-05	14	27.70	93	186
LRR_6	Leucine Rich repeat	0.1	3	23.40	128	141
LRR_8	Leucine rich repeat	2E-10	30	27.00	128	189
LRR_4	Leucine Rich repeats (2 copies)	0.034	4	27.00	129	168
LRR_1	Leucine Rich Repeat	0.1	3	20.60	129	147
LRR_1	Leucine Rich Repeat	0.022	5	20.60	153	172
LRR_4	Leucine Rich repeats (2 copies)	1.3E-05	15	27.00	153	196
LRR_6	Leucine Rich repeat	4.5E-05	13	23.40	176	191
LRR_4	Leucine Rich repeats (2 copies)	1.1E-07	22	27.00	177	218
LRR_1	Leucine Rich Repeat	0.0019	9	20.60	178	194
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.023	4	27.70	202	238
LRR_6	Leucine Rich repeat	0.013	5	23.40	203	217
LRR_4	Leucine Rich repeats (2 copies)	3.3E-07	20	27.00	206	241
LRR_8	Leucine rich repeat	1.9E-12	36	27.00	206	264
LRR_1	Leucine Rich Repeat	0.057	4	20.60	207	227
LRR_6	Leucine Rich repeat	7.7E-05	12	23.40	226	242
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.0018	8	27.70	226	312
LRR_4	Leucine Rich repeats (2 copies)	7.2E-07	19	27.00	228	265
LRR_1	Leucine Rich Repeat	4.1E-05	14	20.60	229	251
LRRNT_2	Leucine rich repeat N-terminal domain	0.19	2	20.70	251	292
LRR_6	Leucine Rich repeat	0.0041	7	23.40	254	265
LRR_1	Leucine Rich Repeat	0.0019	8	20.60	254	272
LRR_4	Leucine Rich repeats (2 copies)	1.3E-06	18	27.00	254	289
LRR_6	Leucine Rich repeat	0.012	5	23.40	276	292
LRR_8	Leucine rich repeat	8.8E-11	31	27.00	277	338
LRR_4	Leucine Rich repeats (2 copies)	2.8E-07	20	27.00	278	314
LRR_1	Leucine Rich Repeat	0.0022	8	20.60	278	300
LRR_6	Leucine Rich repeat	6.4E-05	12	23.40	299	315
LRR_1	Leucine Rich Repeat	0.00071	10	20.60	303	321
LRR_1	Leucine Rich Repeat	0.13	3	20.60	327	349
LRR_4	Leucine Rich repeats (2 copies)	0.00032	11	27.00	327	354
LRR_8	Leucine rich repeat	2.9E-07	20	27.00	327	386
LRR_1	Leucine Rich Repeat	0.69	1	20.60	352	371
LRR_1	Leucine Rich Repeat	0.45	1	20.60	376	398
LRR_8	Leucine rich repeat	1.1E-05	15	27.00	376	434
LRR_4	Leucine Rich repeats (2 copies)	1.2E-05	15	27.00	376	415
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.49	0	27.70	376	407
LRR_6	Leucine Rich repeat	0.6	0	23.40	398	409
LRR_1	Leucine Rich Repeat	0.04	4	20.60	401	422
LRR_4	Leucine Rich repeats (2 copies)	6.8E-05	13	27.00	424	460
LRR_8	Leucine rich repeat	5.2E-06	16	27.00	433	483
LRR_6	Leucine Rich repeat	0.047	4	23.40	446	462
LRR_4	Leucine Rich repeats (2 copies)	7.7E-05	13	27.00	447	474
LRR_8	Leucine rich repeat	2.7E-08	23	27.00	448	507
LRR_1	Leucine Rich Repeat	0.0043	7	20.60	448	470
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.076	2	27.70	448	481
LRR_8	Leucine rich repeat	1.2E-06	18	27.00	473	531
LRR_4	Leucine Rich repeats (2 copies)	0.00026	11	27.00	496	533
LRR_1	Leucine Rich Repeat	0.074	4	20.60	497	518
LRR_6	Leucine Rich repeat	0.84	0	23.40	497	510
LRR_6	Leucine Rich repeat	0.26	1	23.40	517	534
LRR_1	Leucine Rich Repeat	0.62	1	20.60	521	537
LRR_8	Leucine rich repeat	1.6E-08	24	27.00	606	647
LRR_6	Leucine Rich repeat	0.0026	7	23.40	611	625
LRR_4	Leucine Rich repeats (2 copies)	3.6E-07	20	27.00	613	647
LRR_1	Leucine Rich Repeat	0.0047	7	20.60	613	631
LRR_1	Leucine Rich Repeat	0.013	6	20.60	637	655
LRR_6	Leucine Rich repeat	0.01	6	23.40	637	650
LRR_8	Leucine rich repeat	2.4E-06	17	27.00	656	695
LRR_4	Leucine Rich repeats (2 copies)	3.7E-05	14	27.00	659	697
LRR_6	Leucine Rich repeat	0.42	1	23.40	684	697
LRR_1	Leucine Rich Repeat	0.24	2	20.60	687	700
Pkinase	Protein kinase domain	0	146	20.40	841	1050
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	138	23.10	841	1045
APH	Phosphotransferase enzyme family	0.3	0	22.40	867	924
APH	Phosphotransferase enzyme family	0.00074	9	22.40	961	991