c2pfam

AT1G08190.1 :

Domain Description Evalue Bits GA Start End
Trypan_PARP Procyclic acidic repetitive protein (PARP) 0.024 4 40.00 8 42
BUD22 BUD22 0.0004 9 37.00 11 45
FAM176 FAM176 family 0.0045 6 31.50 16 41
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 6.6E-05 13 22.90 71 141
WD40 WD domain, G-beta repeat 0.48 1 21.00 75 83
WD40 WD domain, G-beta repeat 1.5E-06 19 21.00 88 124
Clathrin Region in Clathrin and VPS 0.13 2 23.60 544 569
Clathrin Region in Clathrin and VPS 3.8E-23 71 23.60 635 765
FAM176 FAM176 family 1 -2 31.50 844 870
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 8.3E-05 12 27.30 887 925
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 0.0064 6 27.00 887 919
zf-RING_2 Ring finger domain 1.3E-05 15 27.30 887 919
zf-RING_11 RING-like zinc finger 0.00016 11 27.00 888 916
FAM176 FAM176 family 0.0042 6 31.50 912 960
Trypan_PARP Procyclic acidic repetitive protein (PARP) 0.16 1 40.00 918 954
BUD22 BUD22 0.15 1 37.00 939 956

980

Trypan_PARP
BUD22
FAM176
ANAPC4_WD40
WD40
WD40
Clathrin
Clathrin
FAM176
Zn_ribbon_17
zf-C3HC4_2
zf-RING_2
zf-RING_11
FAM176
Trypan_PARP
BUD22

References:

ANAPC4_WD40

Zn_ribbon_17

zf-C3HC4_2

Trypan_PARP
2342468 Transcription of the procyclic acidic repetitive protein genes of Trypanosoma brucei. Mol Cell Biol 1990;10:3036-3047.

zf-RING_11

BUD22
11452010 A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol Biol Cell. 2001;12:2147-2170.

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

Clathrin
1547490 Folding and trimerization of clathrin subunits at the triskelion hub. Cell 1992;68:899-910.
3480512 Clathrin heavy chain: molecular cloning and complete primary structure. Proc Natl Acad Sci U S A 1987;84:8805-8809.

FAM176

zf-RING_2

Domain	Description	Evalue	Bits	GA	Start	End
Trypan_PARP	Procyclic acidic repetitive protein (PARP)	0.024	4	40.00	8	42
BUD22	BUD22	0.0004	9	37.00	11	45
FAM176	FAM176 family	0.0045	6	31.50	16	41
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	6.6E-05	13	22.90	71	141
WD40	WD domain, G-beta repeat	0.48	1	21.00	75	83
WD40	WD domain, G-beta repeat	1.5E-06	19	21.00	88	124
Clathrin	Region in Clathrin and VPS	0.13	2	23.60	544	569
Clathrin	Region in Clathrin and VPS	3.8E-23	71	23.60	635	765
FAM176	FAM176 family	1	-2	31.50	844	870
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	8.3E-05	12	27.30	887	925
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	0.0064	6	27.00	887	919
zf-RING_2	Ring finger domain	1.3E-05	15	27.30	887	919
zf-RING_11	RING-like zinc finger	0.00016	11	27.00	888	916
FAM176	FAM176 family	0.0042	6	31.50	912	960
Trypan_PARP	Procyclic acidic repetitive protein (PARP)	0.16	1	40.00	918	954
BUD22	BUD22	0.15	1	37.00	939	956