c2pfam

AT1G08590.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 5.8E-10 29 20.70 28 74
LRR_8 Leucine rich repeat 5E-08 22 27.00 80 136
LRR_4 Leucine Rich repeats (2 copies) 0.00012 12 27.00 81 113
LRR_4 Leucine Rich repeats (2 copies) 7E-07 19 27.00 101 137
LRR_6 Leucine Rich repeat 0.04 4 23.40 101 113
LRR_1 Leucine Rich Repeat 0.002 9 20.60 102 124
LRR_6 Leucine Rich repeat 0.86 0 23.40 124 136
LRR_1 Leucine Rich Repeat 0.4 2 20.60 126 142
LRR_8 Leucine rich repeat 3.2E-06 16 27.00 150 209
LRR_1 Leucine Rich Repeat 0.11 3 20.60 151 170
LRR_8 Leucine rich repeat 4.6E-08 22 27.00 174 232
LRR_4 Leucine Rich repeats (2 copies) 0.0032 8 27.00 175 207
LRR_1 Leucine Rich Repeat 0.11 3 20.60 175 196
LRR_6 Leucine Rich repeat 0.02 5 23.40 197 211
LRR_1 Leucine Rich Repeat 0.11 3 20.60 198 215
LRR_8 Leucine rich repeat 2.5E-05 14 27.00 218 253
LRR_4 Leucine Rich repeats (2 copies) 2.4E-05 14 27.00 222 260
LRR_1 Leucine Rich Repeat 0.28 2 20.60 222 244
LRR_6 Leucine Rich repeat 0.31 1 23.40 245 259
LRR_1 Leucine Rich Repeat 0.45 1 20.60 246 266
LRR_8 Leucine rich repeat 2.1E-11 33 27.00 246 305
LRR_4 Leucine Rich repeats (2 copies) 1.2E-07 22 27.00 269 306
LRR_1 Leucine Rich Repeat 0.07 4 20.60 271 290
LRR_6 Leucine Rich repeat 0.00038 10 23.40 293 308
LRR_1 Leucine Rich Repeat 0.083 4 20.60 295 310
LRR_8 Leucine rich repeat 1.4E-07 21 27.00 316 353
LRR_4 Leucine Rich repeats (2 copies) 1.6E-07 21 27.00 317 357
LRR_1 Leucine Rich Repeat 0.036 5 20.60 318 335
LRR_6 Leucine Rich repeat 0.19 2 23.40 318 331
LRR_8 Leucine rich repeat 1.2E-07 21 27.00 341 400
LRR_1 Leucine Rich Repeat 0.077 4 20.60 342 361
LRR_6 Leucine Rich repeat 0.016 5 23.40 363 380
LRR_1 Leucine Rich Repeat 0.044 4 20.60 367 385
LRR_4 Leucine Rich repeats (2 copies) 0.00058 10 27.00 367 402
LRR_6 Leucine Rich repeat 0.3 1 23.40 388 403
LRR_8 Leucine rich repeat 2.2E-07 20 27.00 389 449
LRR_4 Leucine Rich repeats (2 copies) 0.0059 7 27.00 390 425
LRR_1 Leucine Rich Repeat 0.3 2 20.60 390 409
LRR_6 Leucine Rich repeat 0.22 2 23.40 411 427
LRR_8 Leucine rich repeat 6.3E-09 25 27.00 413 473
LRR_4 Leucine Rich repeats (2 copies) 0.0015 9 27.00 417 453
LRR_4 Leucine Rich repeats (2 copies) 5.7E-06 16 27.00 437 477
LRR_6 Leucine Rich repeat 0.018 5 23.40 437 452
LRR_1 Leucine Rich Repeat 0.0099 6 20.60 439 457
LRR_6 Leucine Rich repeat 0.64 0 23.40 460 474
LRR_4 Leucine Rich repeats (2 copies) 0.00047 10 27.00 461 496
LRR_8 Leucine rich repeat 2E-08 23 27.00 462 520
LRR_1 Leucine Rich Repeat 0.12 3 20.60 463 482
LRR_4 Leucine Rich repeats (2 copies) 0.0004 10 27.00 484 518
LRR_4 Leucine Rich repeats (2 copies) 1.9E-05 15 27.00 508 548
LRR_1 Leucine Rich Repeat 0.03 5 20.60 509 526
LRR_6 Leucine Rich repeat 0.026 4 23.40 509 522
LRR_6 Leucine Rich repeat 0.056 3 23.40 533 544
LRR_1 Leucine Rich Repeat 0.073 4 20.60 533 553
LRR_8 Leucine rich repeat 5.5E-11 32 27.00 533 592
LRR_6 Leucine Rich repeat 0.1 3 23.40 556 570
LRR_4 Leucine Rich repeats (2 copies) 2.4E-06 17 27.00 558 593
LRR_1 Leucine Rich Repeat 0.0062 7 20.60 560 576
LRR_6 Leucine Rich repeat 0.017 5 23.40 579 594
LRR_1 Leucine Rich Repeat 0.25 2 20.60 582 598
Pkinase Protein kinase domain 0 155 20.40 716 973
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 140 23.10 716 999
Pkinase_fungal Fungal protein kinase 0.83 -2 24.10 727 752
APH Phosphotransferase enzyme family 0.41 0 22.40 761 817
PIP49_C Pancreatitis induced protein 49 C terminal 0.00023 10 28.10 798 874
Pkinase_fungal Fungal protein kinase 5.2E-05 11 24.10 834 883
APH Phosphotransferase enzyme family 0.00095 8 22.40 848 879

1029

LRRNT_2
LRR_8
LRR_4
LRR_4
LRR_6
LRR_1
LRR_6
LRR_1
LRR_8
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_8
LRR_1
LRR_6
LRR_1
LRR_4
LRR_6
LRR_8
LRR_4
LRR_1
LRR_6
LRR_8
LRR_4
LRR_4
LRR_6
LRR_1
LRR_6
LRR_4
LRR_8
LRR_1
LRR_4
LRR_4
LRR_1
LRR_6
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
Pkinase
PK_Tyr_Ser-Thr
Pkinase_fungal
APH
PIP49_C
Pkinase_fungal
APH

References:

LRR_8

PIP49_C
11281735 Cloning and expression of the mouse PIP49 (Pancreatitis Induced Protein 49) mRNA which encodes a new putative transmembrane protein activated in the pancreas with acute pancreatitis. Mol Cell Biol Res Commun. 2000;4:188-193.

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_4

Pkinase_fungal

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	5.8E-10	29	20.70	28	74
LRR_8	Leucine rich repeat	5E-08	22	27.00	80	136
LRR_4	Leucine Rich repeats (2 copies)	0.00012	12	27.00	81	113
LRR_4	Leucine Rich repeats (2 copies)	7E-07	19	27.00	101	137
LRR_6	Leucine Rich repeat	0.04	4	23.40	101	113
LRR_1	Leucine Rich Repeat	0.002	9	20.60	102	124
LRR_6	Leucine Rich repeat	0.86	0	23.40	124	136
LRR_1	Leucine Rich Repeat	0.4	2	20.60	126	142
LRR_8	Leucine rich repeat	3.2E-06	16	27.00	150	209
LRR_1	Leucine Rich Repeat	0.11	3	20.60	151	170
LRR_8	Leucine rich repeat	4.6E-08	22	27.00	174	232
LRR_4	Leucine Rich repeats (2 copies)	0.0032	8	27.00	175	207
LRR_1	Leucine Rich Repeat	0.11	3	20.60	175	196
LRR_6	Leucine Rich repeat	0.02	5	23.40	197	211
LRR_1	Leucine Rich Repeat	0.11	3	20.60	198	215
LRR_8	Leucine rich repeat	2.5E-05	14	27.00	218	253
LRR_4	Leucine Rich repeats (2 copies)	2.4E-05	14	27.00	222	260
LRR_1	Leucine Rich Repeat	0.28	2	20.60	222	244
LRR_6	Leucine Rich repeat	0.31	1	23.40	245	259
LRR_1	Leucine Rich Repeat	0.45	1	20.60	246	266
LRR_8	Leucine rich repeat	2.1E-11	33	27.00	246	305
LRR_4	Leucine Rich repeats (2 copies)	1.2E-07	22	27.00	269	306
LRR_1	Leucine Rich Repeat	0.07	4	20.60	271	290
LRR_6	Leucine Rich repeat	0.00038	10	23.40	293	308
LRR_1	Leucine Rich Repeat	0.083	4	20.60	295	310
LRR_8	Leucine rich repeat	1.4E-07	21	27.00	316	353
LRR_4	Leucine Rich repeats (2 copies)	1.6E-07	21	27.00	317	357
LRR_1	Leucine Rich Repeat	0.036	5	20.60	318	335
LRR_6	Leucine Rich repeat	0.19	2	23.40	318	331
LRR_8	Leucine rich repeat	1.2E-07	21	27.00	341	400
LRR_1	Leucine Rich Repeat	0.077	4	20.60	342	361
LRR_6	Leucine Rich repeat	0.016	5	23.40	363	380
LRR_1	Leucine Rich Repeat	0.044	4	20.60	367	385
LRR_4	Leucine Rich repeats (2 copies)	0.00058	10	27.00	367	402
LRR_6	Leucine Rich repeat	0.3	1	23.40	388	403
LRR_8	Leucine rich repeat	2.2E-07	20	27.00	389	449
LRR_4	Leucine Rich repeats (2 copies)	0.0059	7	27.00	390	425
LRR_1	Leucine Rich Repeat	0.3	2	20.60	390	409
LRR_6	Leucine Rich repeat	0.22	2	23.40	411	427
LRR_8	Leucine rich repeat	6.3E-09	25	27.00	413	473
LRR_4	Leucine Rich repeats (2 copies)	0.0015	9	27.00	417	453
LRR_4	Leucine Rich repeats (2 copies)	5.7E-06	16	27.00	437	477
LRR_6	Leucine Rich repeat	0.018	5	23.40	437	452
LRR_1	Leucine Rich Repeat	0.0099	6	20.60	439	457
LRR_6	Leucine Rich repeat	0.64	0	23.40	460	474
LRR_4	Leucine Rich repeats (2 copies)	0.00047	10	27.00	461	496
LRR_8	Leucine rich repeat	2E-08	23	27.00	462	520
LRR_1	Leucine Rich Repeat	0.12	3	20.60	463	482
LRR_4	Leucine Rich repeats (2 copies)	0.0004	10	27.00	484	518
LRR_4	Leucine Rich repeats (2 copies)	1.9E-05	15	27.00	508	548
LRR_1	Leucine Rich Repeat	0.03	5	20.60	509	526
LRR_6	Leucine Rich repeat	0.026	4	23.40	509	522
LRR_6	Leucine Rich repeat	0.056	3	23.40	533	544
LRR_1	Leucine Rich Repeat	0.073	4	20.60	533	553
LRR_8	Leucine rich repeat	5.5E-11	32	27.00	533	592
LRR_6	Leucine Rich repeat	0.1	3	23.40	556	570
LRR_4	Leucine Rich repeats (2 copies)	2.4E-06	17	27.00	558	593
LRR_1	Leucine Rich Repeat	0.0062	7	20.60	560	576
LRR_6	Leucine Rich repeat	0.017	5	23.40	579	594
LRR_1	Leucine Rich Repeat	0.25	2	20.60	582	598
Pkinase	Protein kinase domain	0	155	20.40	716	973
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	140	23.10	716	999
Pkinase_fungal	Fungal protein kinase	0.83	-2	24.10	727	752
APH	Phosphotransferase enzyme family	0.41	0	22.40	761	817
PIP49_C	Pancreatitis induced protein 49 C terminal	0.00023	10	28.10	798	874
Pkinase_fungal	Fungal protein kinase	5.2E-05	11	24.10	834	883
APH	Phosphotransferase enzyme family	0.00095	8	22.40	848	879