c2pfam

AT1G08630.1 :

Domain Description Evalue Bits GA Start End
Beta_elim_lyase Beta-eliminating lyase 0 341 20.50 7 294
Aminotran_1_2 Aminotransferase class I and II 2.4E-18 55 19.70 17 335
OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain 6.8E-05 11 19.50 19 91
DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family 8.1E-09 24 19.80 24 179
Aminotran_3 Aminotransferase class-III 0.022 2 19.90 33 66
Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme 6.1E-08 21 19.70 37 178
Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain 1.5E-06 16 19.80 84 214
Aminotran_5 Aminotransferase class-V 1.2E-05 14 20.00 101 230
Aminotran_3 Aminotransferase class-III 0.0072 4 19.90 140 176
DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family 0.074 1 19.80 226 315
Aminotran_3 Aminotransferase class-III 4.6E-05 11 19.90 232 348
OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain 0.029 2 19.50 283 337

358

Beta_elim_lyase
Aminotran_1_2
OKR_DC_1
DegT_DnrJ_EryC1
Aminotran_3
Cys_Met_Meta_PP
Pyridoxal_deC
Aminotran_5
Aminotran_3
DegT_DnrJ_EryC1
Aminotran_3
OKR_DC_1

References:

Aminotran_3
9514741 Crystal structure of human recombinant ornithine aminotransferase. J Mol Biol 1998;277:81-102.

Aminotran_1_2
10029535 Structure of Thermus thermophilus HB8 aspartate aminotransferase and its complex with maleate. Biochemistry 1999;38:2413-2424.
10417420 Crystallization and preliminary crystallographic analysis of the Escherichia coli tyrosine aminotransferase. Acta Crystallogr D Biol Crystallogr 1999;55:1474-1477.

Aminotran_5

Beta_elim_lyase
9551100 Crystal structure of tryptophanase. J Mol Biol 1998;276:603-623.

DegT_DnrJ_EryC1
9238101 Identification of stsC, the gene encoding the L-glutamine:scyllo-inosose aminotransferase from streptomycin-producing Streptomycetes. Arch Microbiol 1997;168:102-113.

Pyridoxal_deC
7940675 Mammalian L-amino acid decarboxylases producing 1,4-diamines: analogies among differences. Trends Biochem Sci 1994;19:318-319.

OKR_DC_1
7563080 Crystallographic structure of a PLP-dependent ornithine decarboxylase from Lactobacillus 30a to 3.0 A resolution. J Mol Biol 1995;252:643-655.

Cys_Met_Meta_PP
8831789 Crystal structure of the pyridoxal-5'-phosphate dependent cystathionine beta-lyase from Escherichia coli at 1.83 A. J Mol Biol 1996;262:202-224.
9843488 Crystal structure of Escherichia coli cystathionine gamma-synthase at 1.5 A resolution. EMBO J 1998;17:6827-6838.

Domain	Description	Evalue	Bits	GA	Start	End
Beta_elim_lyase	Beta-eliminating lyase	0	341	20.50	7	294
Aminotran_1_2	Aminotransferase class I and II	2.4E-18	55	19.70	17	335
OKR_DC_1	Orn/Lys/Arg decarboxylase, major domain	6.8E-05	11	19.50	19	91
DegT_DnrJ_EryC1	DegT/DnrJ/EryC1/StrS aminotransferase family	8.1E-09	24	19.80	24	179
Aminotran_3	Aminotransferase class-III	0.022	2	19.90	33	66
Cys_Met_Meta_PP	Cys/Met metabolism PLP-dependent enzyme	6.1E-08	21	19.70	37	178
Pyridoxal_deC	Pyridoxal-dependent decarboxylase conserved domain	1.5E-06	16	19.80	84	214
Aminotran_5	Aminotransferase class-V	1.2E-05	14	20.00	101	230
Aminotran_3	Aminotransferase class-III	0.0072	4	19.90	140	176
DegT_DnrJ_EryC1	DegT/DnrJ/EryC1/StrS aminotransferase family	0.074	1	19.80	226	315
Aminotran_3	Aminotransferase class-III	4.6E-05	11	19.90	232	348
OKR_DC_1	Orn/Lys/Arg decarboxylase, major domain	0.029	2	19.50	283	337