c2pfam

AT2G13790.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.7E-13 40 20.70 30 72
LRR_4 Leucine Rich repeats (2 copies) 0.00017 12 27.00 77 111
LRR_8 Leucine rich repeat 2.9E-07 20 27.00 97 135
LRR_6 Leucine Rich repeat 0.017 5 23.40 99 114
LRR_8 Leucine rich repeat 1.1E-07 21 27.00 100 159
LRR_4 Leucine Rich repeats (2 copies) 2.8E-07 21 27.00 100 136
LRR_1 Leucine Rich Repeat 0.0063 7 20.60 100 119
LRR_1 Leucine Rich Repeat 0.076 4 20.60 125 146
LRR_8 Leucine rich repeat 0.00029 10 27.00 135 182
LRR_4 Leucine Rich repeats (2 copies) 1.5E-07 21 27.00 148 186
LRR_1 Leucine Rich Repeat 0.0086 7 20.60 148 164
LRR_6 Leucine Rich repeat 0.99 0 23.40 148 162
LRR_8 Leucine rich repeat 0.0021 8 27.00 149 183
LRR_1 Leucine Rich Repeat 0.0014 9 20.60 171 187
LRR_8 Leucine rich repeat 0.0084 6 27.00 172 183
LRR_6 Leucine Rich repeat 0.027 5 23.40 172 185
LRR_4 Leucine Rich repeats (2 copies) 0.13 3 27.00 199 211
Pkinase Protein kinase domain 0 157 20.40 295 566
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 151 23.10 296 568
ABC1 ABC1 family 0.00023 11 20.60 298 327
Kinase-like Kinase-like 7.7E-05 12 25.00 379 455
APH Phosphotransferase enzyme family 3.7E-05 13 22.40 388 446
Pkinase_fungal Fungal protein kinase 4.6E-06 15 24.10 413 470

620

LRRNT_2
LRR_4
LRR_8
LRR_6
LRR_8
LRR_4
LRR_1
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_8
LRR_1
LRR_8
LRR_6
LRR_4
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
APH
Pkinase_fungal

References:

LRR_8

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Pkinase_fungal

Kinase-like

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_4

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.7E-13	40	20.70	30	72
LRR_4	Leucine Rich repeats (2 copies)	0.00017	12	27.00	77	111
LRR_8	Leucine rich repeat	2.9E-07	20	27.00	97	135
LRR_6	Leucine Rich repeat	0.017	5	23.40	99	114
LRR_8	Leucine rich repeat	1.1E-07	21	27.00	100	159
LRR_4	Leucine Rich repeats (2 copies)	2.8E-07	21	27.00	100	136
LRR_1	Leucine Rich Repeat	0.0063	7	20.60	100	119
LRR_1	Leucine Rich Repeat	0.076	4	20.60	125	146
LRR_8	Leucine rich repeat	0.00029	10	27.00	135	182
LRR_4	Leucine Rich repeats (2 copies)	1.5E-07	21	27.00	148	186
LRR_1	Leucine Rich Repeat	0.0086	7	20.60	148	164
LRR_6	Leucine Rich repeat	0.99	0	23.40	148	162
LRR_8	Leucine rich repeat	0.0021	8	27.00	149	183
LRR_1	Leucine Rich Repeat	0.0014	9	20.60	171	187
LRR_8	Leucine rich repeat	0.0084	6	27.00	172	183
LRR_6	Leucine Rich repeat	0.027	5	23.40	172	185
LRR_4	Leucine Rich repeats (2 copies)	0.13	3	27.00	199	211
Pkinase	Protein kinase domain	0	157	20.40	295	566
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	151	23.10	296	568
ABC1	ABC1 family	0.00023	11	20.60	298	327
Kinase-like	Kinase-like	7.7E-05	12	25.00	379	455
APH	Phosphotransferase enzyme family	3.7E-05	13	22.40	388	446
Pkinase_fungal	Fungal protein kinase	4.6E-06	15	24.10	413	470