c2pfam

AT2G15680.1 :

Domain Description Evalue Bits GA Start End
EF-hand_8 EF-hand domain pair 9.4E-09 25 28.00 46 76
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 5.4E-05 13 21.40 48 108
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.0069 6 21.30 48 76
EF-hand_7 EF-hand domain pair 6.1E-15 45 30.00 50 112
EF-hand_1 EF hand 1.8E-09 27 25.40 50 77
EF-hand_6 EF-hand domain 5.9E-09 25 25.00 50 79
EF-hand_5 EF hand 1E-08 24 25.90 52 74
EF-hand_9 EF-hand domain 0.0011 9 37.00 53 107
Caleosin Caleosin related protein 0.0059 6 20.60 55 81
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.39 1 26.90 58 65
Dockerin_1 Dockerin type I repeat 9E-06 16 20.50 58 103
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.00028 11 21.30 87 109
EF-hand_6 EF-hand domain 1.1E-08 24 25.00 89 115
EF-hand_1 EF hand 1.5E-10 30 25.40 89 113
EF-hand_8 EF-hand domain pair 8.8E-08 22 28.00 90 113
EF-hand_5 EF hand 1E-08 24 25.90 90 107
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.0055 7 26.90 93 103
TSP3_bac Bacterial TSP3 repeat 0.036 4 25.00 95 101
EF-hand_7 EF-hand domain pair 5.1E-15 46 30.00 120 183
EF-hand_8 EF-hand domain pair 6.2E-07 19 28.00 120 146
EF-hand_1 EF hand 5E-09 25 25.40 121 149
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 1.7E-05 15 21.40 121 180
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.03 5 26.90 125 136
EF-hand_9 EF-hand domain 0.00041 11 37.00 126 183
Dockerin_1 Dockerin type I repeat 0.00037 11 20.50 128 145
EF-hand_5 EF hand 1.7E-08 24 25.90 128 144
EF-hand_6 EF-hand domain 3.5E-06 17 25.00 129 146
Caleosin Caleosin related protein 0.052 3 20.60 129 151
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.00089 9 21.30 132 182
EF-hand_8 EF-hand domain pair 1.9E-09 27 28.00 148 182
EF-hand_1 EF hand 6.3E-09 25 25.40 158 184
Dockerin_1 Dockerin type I repeat 0.028 4 20.50 160 175
VCBS Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 0.041 4 26.90 162 171
EF-hand_6 EF-hand domain 5.1E-06 16 25.00 162 183
EF-hand_5 EF hand 4.8E-07 19 25.90 163 182
TSP3_bac Bacterial TSP3 repeat 0.0079 6 25.00 166 176

187

EF-hand_8
SPARC_Ca_bdg
EF-hand_4
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_9
Caleosin
VCBS
Dockerin_1
EF-hand_4
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
VCBS
TSP3_bac
EF-hand_7
EF-hand_8
EF-hand_1
SPARC_Ca_bdg
VCBS
EF-hand_9
Dockerin_1
EF-hand_5
EF-hand_6
Caleosin
EF-hand_4
EF-hand_8
EF-hand_1
Dockerin_1
VCBS
EF-hand_6
EF-hand_5
TSP3_bac

References:

EF-hand_9

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

EF-hand_1

EF-hand_8

Caleosin
11171180 New insights into the mechanisms of lipid-body biogenesis in plants and other organisms. Biochem Soc Trans 2000;28:710-711.

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

VCBS

TSP3_bac

Domain	Description	Evalue	Bits	GA	Start	End
EF-hand_8	EF-hand domain pair	9.4E-09	25	28.00	46	76
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	5.4E-05	13	21.40	48	108
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.0069	6	21.30	48	76
EF-hand_7	EF-hand domain pair	6.1E-15	45	30.00	50	112
EF-hand_1	EF hand	1.8E-09	27	25.40	50	77
EF-hand_6	EF-hand domain	5.9E-09	25	25.00	50	79
EF-hand_5	EF hand	1E-08	24	25.90	52	74
EF-hand_9	EF-hand domain	0.0011	9	37.00	53	107
Caleosin	Caleosin related protein	0.0059	6	20.60	55	81
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.39	1	26.90	58	65
Dockerin_1	Dockerin type I repeat	9E-06	16	20.50	58	103
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.00028	11	21.30	87	109
EF-hand_6	EF-hand domain	1.1E-08	24	25.00	89	115
EF-hand_1	EF hand	1.5E-10	30	25.40	89	113
EF-hand_8	EF-hand domain pair	8.8E-08	22	28.00	90	113
EF-hand_5	EF hand	1E-08	24	25.90	90	107
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.0055	7	26.90	93	103
TSP3_bac	Bacterial TSP3 repeat	0.036	4	25.00	95	101
EF-hand_7	EF-hand domain pair	5.1E-15	46	30.00	120	183
EF-hand_8	EF-hand domain pair	6.2E-07	19	28.00	120	146
EF-hand_1	EF hand	5E-09	25	25.40	121	149
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	1.7E-05	15	21.40	121	180
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.03	5	26.90	125	136
EF-hand_9	EF-hand domain	0.00041	11	37.00	126	183
Dockerin_1	Dockerin type I repeat	0.00037	11	20.50	128	145
EF-hand_5	EF hand	1.7E-08	24	25.90	128	144
EF-hand_6	EF-hand domain	3.5E-06	17	25.00	129	146
Caleosin	Caleosin related protein	0.052	3	20.60	129	151
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.00089	9	21.30	132	182
EF-hand_8	EF-hand domain pair	1.9E-09	27	28.00	148	182
EF-hand_1	EF hand	6.3E-09	25	25.40	158	184
Dockerin_1	Dockerin type I repeat	0.028	4	20.50	160	175
VCBS	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella	0.041	4	26.90	162	171
EF-hand_6	EF-hand domain	5.1E-06	16	25.00	162	183
EF-hand_5	EF hand	4.8E-07	19	25.90	163	182
TSP3_bac	Bacterial TSP3 repeat	0.0079	6	25.00	166	176