c2pfam

AT1G01800.1 :

Domain Description Evalue Bits GA Start End
adh_short short chain dehydrogenase 1.2E-31 99 20.50 6 170
KR KR domain 3.5E-10 29 22.60 8 111
Epimerase NAD dependent epimerase/dehydratase family 2.8E-07 19 20.60 8 103
Polysacc_synt_2 Polysaccharide biosynthesis protein 0.00014 10 20.20 8 62
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 7.7E-05 11 27.00 9 77
adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4.8E-23 71 27.00 13 168
MA3 MA3 domain 0.0033 6 20.70 49 80
Polysacc_synt_2 Polysaccharide biosynthesis protein 0.16 0 20.20 129 148
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 0.23 0 27.00 130 160
MA3 MA3 domain 0.033 3 20.70 189 211
adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.3E-08 22 27.00 212 256
adh_short short chain dehydrogenase 2.7E-08 22 20.50 216 256
Epimerase NAD dependent epimerase/dehydratase family 0.11 1 20.60 217 247

295

adh_short
KR
Epimerase
Polysacc_synt_2
GDP_Man_Dehyd
adh_short_C2
MA3
Polysacc_synt_2
GDP_Man_Dehyd
MA3
adh_short_C2
adh_short
Epimerase

References:

KR

adh_short
9735295 The refined crystal structure of Drosophila lebanonensis alcohol dehydrogenase at 1.9 A resolution. J Mol Biol 1998;282:383-399.
10387002 Structure of tropinone reductase-II complexed with NADP+ and pseudotropine at 1.9 A resolution: implication for stereospecific substrate binding and catalysis. Biochemistry 1999;38:7630-7637.

GDP_Man_Dehyd

MA3
10973054 Novel eIF4G domain homologues linking mRNA translation with nonsense-mediated mRNA decay. Trends Biochem Sci 2000;25:423-426.

Epimerase
9174344 Structural analysis of UDP-sugar binding to UDP-galactose 4-epimerase from Escherichia coli. Biochemistry 1997;36:6294-6304.

Polysacc_synt_2
7961465 Sequence analysis and molecular characterization of genes required for the biosynthesis of type 1 capsular polysaccharide in Staphylococcus aureus. J Bacteriol 1994;176:7005-7016.
9079898 Identification of additional genes required for O-antigen biosynthesis in Vibrio cholerae O1. J Bacteriol 1997;179:2147-2153.

adh_short_C2

Domain	Description	Evalue	Bits	GA	Start	End
adh_short	short chain dehydrogenase	1.2E-31	99	20.50	6	170
KR	KR domain	3.5E-10	29	22.60	8	111
Epimerase	NAD dependent epimerase/dehydratase family	2.8E-07	19	20.60	8	103
Polysacc_synt_2	Polysaccharide biosynthesis protein	0.00014	10	20.20	8	62
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	7.7E-05	11	27.00	9	77
adh_short_C2	Enoyl-(Acyl carrier protein) reductase	4.8E-23	71	27.00	13	168
MA3	MA3 domain	0.0033	6	20.70	49	80
Polysacc_synt_2	Polysaccharide biosynthesis protein	0.16	0	20.20	129	148
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	0.23	0	27.00	130	160
MA3	MA3 domain	0.033	3	20.70	189	211
adh_short_C2	Enoyl-(Acyl carrier protein) reductase	3.3E-08	22	27.00	212	256
adh_short	short chain dehydrogenase	2.7E-08	22	20.50	216	256
Epimerase	NAD dependent epimerase/dehydratase family	0.11	1	20.60	217	247