c2pfam

AT2G17730.1 :

Domain Description Evalue Bits GA Start End
Tim17 Tim17/Tim22/Tim23 family 0.92 1 29.70 34 53
DUF5518 Family of unknown function (DUF5518) 0.00011 13 27.00 40 98
DUF456 Protein of unknown function (DUF456) 0.017 6 24.30 41 90
Gly-zipper_Omp Glycine zipper 1E-05 16 24.90 41 73
Rick_17kDa_Anti Rickettsia 17 kDa surface antigen 0.87 0 33.00 42 49
Gly-zipper_YMGG YMGG-like Gly-zipper 3.7E-10 30 28.90 55 91
Gly-zipper_OmpA Glycine-zipper domain 1.2E-08 25 27.00 56 92
DUF1269 Protein of unknown function (DUF1269) 0.036 5 21.10 56 90
Romo1 Reactive mitochondrial oxygen species modulator 1 0.078 4 21.70 56 71
Gly-zipper_Omp Glycine zipper 1.4E-07 22 24.90 58 91
Rick_17kDa_Anti Rickettsia 17 kDa surface antigen 1.1E-06 19 33.00 58 91
Tim17 Tim17/Tim22/Tim23 family 0.0075 7 29.70 61 93
Romo1 Reactive mitochondrial oxygen species modulator 1 0.0046 8 21.70 75 93
DUF456 Protein of unknown function (DUF456) 0.069 4 24.30 79 147
DUF1269 Protein of unknown function (DUF1269) 1 1 21.10 135 156
zf-HC5HC2H PHD-like zinc-binding domain 4.5E-05 14 29.10 176 225
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 5.4E-05 14 27.30 191 235
Prok-RING_1 Prokaryotic RING finger family 1 0.0026 8 29.10 193 225
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 9.9E-07 19 27.00 194 241
FANCL_C FANCL C-terminal domain 0.011 7 20.70 194 229
zf-RING_2 Ring finger domain 1.2E-14 45 27.30 194 238
zf-RING_11 RING-like zinc finger 3.1E-11 34 27.00 196 224
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 8.9E-09 26 27.00 196 237
zf-RING_UBOX RING-type zinc-finger 1.5E-07 22 25.20 196 235
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.5E-07 21 21.00 196 237
zf-RING_5 zinc-RING finger domain 2.1E-06 18 27.90 196 239
Prok-RING_4 Prokaryotic RING finger family 4 2.1E-05 15 27.00 196 241
zf-rbx1 RING-H2 zinc finger domain 1.9E-09 29 31.00 208 238
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 5E-06 17 21.40 212 239
zf-RING-like RING-like domain 0.022 6 21.60 213 237
Prok-RING_1 Prokaryotic RING finger family 1 0.83 0 29.10 233 240

241

Tim17
DUF5518
DUF456
Gly-zipper_Omp
Rick_17kDa_Anti
Gly-zipper_YMGG
Gly-zipper_OmpA
DUF1269
Romo1
Gly-zipper_Omp
Rick_17kDa_Anti
Tim17
Romo1
DUF456
DUF1269
zf-HC5HC2H
Zn_ribbon_17
Prok-RING_1
zf-C3HC4_3
FANCL_C
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
Prok-RING_4
zf-rbx1
zf-ANAPC11
zf-RING-like
Prok-RING_1

References:

Rick_17kDa_Anti
3139629 Expression of the gene encoding the 17-kilodalton antigen from Rickettsia rickettsii: transcription and posttranslational modification. J Bacteriol 1988;170:4493-4500.

Gly-zipper_YMGG

Gly-zipper_OmpA

Gly-zipper_Omp

Prok-RING_4

zf-HC5HC2H

Tim17
8893850 The preprotein translocase of the inner mitochondrial membrane: evolutionary conservation of targeting and assembly of Tim17. J Mol Biol 1996;262:389-395.

Romo1
16842742 A novel protein, Romo1, induces ROS production in the mitochondria. Biochem Biophys Res Commun. 2006;347:649-655.
18313394 A critical role for Romo1-derived ROS in cell proliferation. Biochem Biophys Res Commun. 2008;369:672-678.
18836179 Replicative senescence induced by Romo1-derived reactive oxygen species. J Biol Chem. 2008;283:33763-33771.
17537404 Drug resistance to 5-FU linked to reactive oxygen species modulator 1. Biochem Biophys Res Commun. 2007;359:304-310.

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-RING_UBOX

zf-ANAPC11

zf-RING_11

DUF1269

zf-RING_5

DUF5518

DUF456

zf-rbx1

zf-RING-like

FANCL_C
16474167 The WD40 repeats of FANCL are required for Fanconi anemia core complex assembly. J Biol Chem. 2006;281:10896-10905.

Zn_ribbon_17

zf-C3HC4_3

zf-C3HC4_2

zf-RING_2

Prok-RING_1

Domain	Description	Evalue	Bits	GA	Start	End
Tim17	Tim17/Tim22/Tim23 family	0.92	1	29.70	34	53
DUF5518	Family of unknown function (DUF5518)	0.00011	13	27.00	40	98
DUF456	Protein of unknown function (DUF456)	0.017	6	24.30	41	90
Gly-zipper_Omp	Glycine zipper	1E-05	16	24.90	41	73
Rick_17kDa_Anti	Rickettsia 17 kDa surface antigen	0.87	0	33.00	42	49
Gly-zipper_YMGG	YMGG-like Gly-zipper	3.7E-10	30	28.90	55	91
Gly-zipper_OmpA	Glycine-zipper domain	1.2E-08	25	27.00	56	92
DUF1269	Protein of unknown function (DUF1269)	0.036	5	21.10	56	90
Romo1	Reactive mitochondrial oxygen species modulator 1	0.078	4	21.70	56	71
Gly-zipper_Omp	Glycine zipper	1.4E-07	22	24.90	58	91
Rick_17kDa_Anti	Rickettsia 17 kDa surface antigen	1.1E-06	19	33.00	58	91
Tim17	Tim17/Tim22/Tim23 family	0.0075	7	29.70	61	93
Romo1	Reactive mitochondrial oxygen species modulator 1	0.0046	8	21.70	75	93
DUF456	Protein of unknown function (DUF456)	0.069	4	24.30	79	147
DUF1269	Protein of unknown function (DUF1269)	1	1	21.10	135	156
zf-HC5HC2H	PHD-like zinc-binding domain	4.5E-05	14	29.10	176	225
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	5.4E-05	14	27.30	191	235
Prok-RING_1	Prokaryotic RING finger family 1	0.0026	8	29.10	193	225
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	9.9E-07	19	27.00	194	241
FANCL_C	FANCL C-terminal domain	0.011	7	20.70	194	229
zf-RING_2	Ring finger domain	1.2E-14	45	27.30	194	238
zf-RING_11	RING-like zinc finger	3.1E-11	34	27.00	196	224
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	8.9E-09	26	27.00	196	237
zf-RING_UBOX	RING-type zinc-finger	1.5E-07	22	25.20	196	235
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	2.5E-07	21	21.00	196	237
zf-RING_5	zinc-RING finger domain	2.1E-06	18	27.90	196	239
Prok-RING_4	Prokaryotic RING finger family 4	2.1E-05	15	27.00	196	241
zf-rbx1	RING-H2 zinc finger domain	1.9E-09	29	31.00	208	238
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	5E-06	17	21.40	212	239
zf-RING-like	RING-like domain	0.022	6	21.60	213	237
Prok-RING_1	Prokaryotic RING finger family 1	0.83	0	29.10	233	240