c2pfam

AT2G17890.1 :

Domain Description Evalue Bits GA Start End
Pkinase Protein kinase domain 0 235 20.40 108 368
Kinase-like Kinase-like 0.028 4 25.00 108 168
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 8.9E-34 107 23.10 110 361
APH Phosphotransferase enzyme family 0.0015 8 22.40 121 205
Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 1E-07 21 20.90 137 249
Kinase-like Kinase-like 1.5E-08 24 25.00 172 319
Dockerin_1 Dockerin type I repeat 0.3 1 20.50 203 218
APH Phosphotransferase enzyme family 0.00058 10 22.40 228 251
EF-hand_8 EF-hand domain pair 0.00013 12 28.00 399 440
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.001 9 21.30 414 476
EF-hand_7 EF-hand domain pair 3.6E-11 33 30.00 415 476
EF-hand_6 EF-hand domain 4.3E-08 23 25.00 415 442
EF-hand_1 EF hand 2.1E-08 23 25.40 415 442
EF-hand_5 EF hand 3E-08 23 25.90 416 438
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.021 5 21.40 419 474
Dockerin_1 Dockerin type I repeat 0.47 1 20.50 420 432
EF-hand_8 EF-hand domain pair 1.9E-07 21 28.00 428 477
EF-hand_1 EF hand 3.1E-06 17 25.40 454 476
EF-hand_6 EF-hand domain 0.0012 9 25.00 455 476
EF-hand_5 EF hand 7.2E-05 12 25.90 456 473
Dockerin_1 Dockerin type I repeat 0.0023 8 20.50 461 513
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 1.1E-07 22 21.40 481 545
EF-hand_7 EF-hand domain pair 6.4E-13 39 30.00 496 549
EF-hand_1 EF hand 7.6E-09 25 25.40 496 516
EF-hand_6 EF-hand domain 3.5E-08 23 25.00 496 517
EF-hand_8 EF-hand domain pair 0.0023 8 28.00 497 514
EF-hand_5 EF hand 2.9E-09 26 25.90 497 516
EF-hand_8 EF-hand domain pair 9.3E-08 22 28.00 507 549
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.0065 6 21.30 526 548
EF-hand_5 EF hand 5.2E-08 22 25.90 529 549
EF-hand_1 EF hand 7.6E-09 25 25.40 530 551
Dockerin_1 Dockerin type I repeat 0.02 5 20.50 530 544
EF-hand_6 EF-hand domain 7E-06 16 25.00 532 551

571

Pkinase
Kinase-like
PK_Tyr_Ser-Thr
APH
Kdo
Kinase-like
Dockerin_1
APH
EF-hand_8
EF-hand_4
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
SPARC_Ca_bdg
Dockerin_1
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_5
Dockerin_1
SPARC_Ca_bdg
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_8
EF-hand_4
EF-hand_5
EF-hand_1
Dockerin_1
EF-hand_6

References:

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

EF-hand_8

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

Kinase-like

EF-hand_1

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

Kdo
11069912 Purification and characterization of WaaP from Escherichia coli, a lipopolysaccharide kinase essential for outer membrane stability. J Biol Chem 2001;276:5498-5504.
12021457 Lipopolysaccharide phosphorylating enzymes encoded in the genomes of Gram-negative bacteria are related to the eukaryotic protein kinases. Protein Sci 2002;11:1580-1584.
10531340 A Haemophilus influenzae gene that encodes a membrane bound 3-deoxy-D-manno-octulosonic acid (Kdo) kinase. Possible involvement of kdo phosphorylation in bacterial virulence. J Biol Chem 1999;274:31391-31400.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
Pkinase	Protein kinase domain	0	235	20.40	108	368
Kinase-like	Kinase-like	0.028	4	25.00	108	168
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	8.9E-34	107	23.10	110	361
APH	Phosphotransferase enzyme family	0.0015	8	22.40	121	205
Kdo	Lipopolysaccharide kinase (Kdo/WaaP) family	1E-07	21	20.90	137	249
Kinase-like	Kinase-like	1.5E-08	24	25.00	172	319
Dockerin_1	Dockerin type I repeat	0.3	1	20.50	203	218
APH	Phosphotransferase enzyme family	0.00058	10	22.40	228	251
EF-hand_8	EF-hand domain pair	0.00013	12	28.00	399	440
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.001	9	21.30	414	476
EF-hand_7	EF-hand domain pair	3.6E-11	33	30.00	415	476
EF-hand_6	EF-hand domain	4.3E-08	23	25.00	415	442
EF-hand_1	EF hand	2.1E-08	23	25.40	415	442
EF-hand_5	EF hand	3E-08	23	25.90	416	438
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.021	5	21.40	419	474
Dockerin_1	Dockerin type I repeat	0.47	1	20.50	420	432
EF-hand_8	EF-hand domain pair	1.9E-07	21	28.00	428	477
EF-hand_1	EF hand	3.1E-06	17	25.40	454	476
EF-hand_6	EF-hand domain	0.0012	9	25.00	455	476
EF-hand_5	EF hand	7.2E-05	12	25.90	456	473
Dockerin_1	Dockerin type I repeat	0.0023	8	20.50	461	513
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	1.1E-07	22	21.40	481	545
EF-hand_7	EF-hand domain pair	6.4E-13	39	30.00	496	549
EF-hand_1	EF hand	7.6E-09	25	25.40	496	516
EF-hand_6	EF-hand domain	3.5E-08	23	25.00	496	517
EF-hand_8	EF-hand domain pair	0.0023	8	28.00	497	514
EF-hand_5	EF hand	2.9E-09	26	25.90	497	516
EF-hand_8	EF-hand domain pair	9.3E-08	22	28.00	507	549
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.0065	6	21.30	526	548
EF-hand_5	EF hand	5.2E-08	22	25.90	529	549
EF-hand_1	EF hand	7.6E-09	25	25.40	530	551
Dockerin_1	Dockerin type I repeat	0.02	5	20.50	530	544
EF-hand_6	EF-hand domain	7E-06	16	25.00	532	551