c2pfam

AT2G18520.1 :

Domain Description Evalue Bits GA Start End
ATP13 Mitochondrial ATPase expression 0.0039 6 26.70 94 127
PPR_1 PPR repeat 7.1E-07 18 23.80 106 128
PPR PPR repeat 5.2E-09 25 25.00 106 132
PPR_2 PPR repeat family 5.8E-06 16 30.00 107 133
PPR_3 Pentatricopeptide repeat domain 8.3E-06 15 25.00 107 147
PPR_long Pentacotripeptide-repeat region of PRORP 2.5E-08 22 27.00 117 216
PPR_1 PPR repeat 0.5 -1 23.80 136 144
PPR_2 PPR repeat family 2.3E-10 30 30.00 136 185
PPR PPR repeat 0.00015 11 25.00 138 163
ATP13 Mitochondrial ATPase expression 0.23 0 26.70 143 175
PPR_3 Pentatricopeptide repeat domain 1.5E-08 24 25.00 168 218
PPR_1 PPR repeat 3.8E-11 32 23.80 169 201
PPR_2 PPR repeat family 1.7E-11 33 30.00 172 220
PPR PPR repeat 3.4E-10 29 25.00 175 205
ATP13 Mitochondrial ATPase expression 0.69 -1 26.70 180 198
PPR_1 PPR repeat 2.9E-07 19 23.80 203 236
PPR_2 PPR repeat family 3.8E-10 29 30.00 209 249
PPR PPR repeat 2E-09 26 25.00 211 240
PPR_3 Pentatricopeptide repeat domain 5.1E-08 22 25.00 233 288
PPR_long Pentacotripeptide-repeat region of PRORP 3.2E-06 16 27.00 233 305
ATP13 Mitochondrial ATPase expression 0.28 0 26.70 245 301
PPR_2 PPR repeat family 6.7E-08 22 30.00 257 289
PPR PPR repeat 0.13 2 25.00 259 273
PPR_1 PPR repeat 3.2E-09 25 23.80 273 302
PPR_2 PPR repeat family 3.8E-11 32 30.00 276 320
PPR PPR repeat 2.6E-08 23 25.00 279 302
PPR_1 PPR repeat 1.1E-05 14 23.80 306 333
PPR_2 PPR repeat family 0.004 6 30.00 307 333
PPR PPR repeat 0.0017 8 25.00 311 334
ATP13 Mitochondrial ATPase expression 0.21 1 26.70 340 358
PPR_3 Pentatricopeptide repeat domain 0.18 1 25.00 342 373
PPR_2 PPR repeat family 0.15 1 30.00 345 364
PPR PPR repeat 0.072 3 25.00 351 365
PPR_1 PPR repeat 1 -2 23.80 353 363
Macro Macro domain 5.1E-05 12 21.10 357 405

418

ATP13
PPR_1
PPR
PPR_2
PPR_3
PPR_long
PPR_1
PPR_2
PPR
ATP13
PPR_3
PPR_1
PPR_2
PPR
ATP13
PPR_1
PPR_2
PPR
PPR_3
PPR_long
ATP13
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
ATP13
PPR_3
PPR_2
PPR
PPR_1
Macro

References:

Macro
10550052 A biochemical genomics approach for identifying genes by the activity of their products. Science 1999;286:1153-1155.
15902274 The macro domain is an ADP-ribose binding module. EMBO J 2005;24:1911-1920.
10550052 A biochemical genomics approach for identifying genes by the activity of their products. Science 1999;286:1153-1155.
15902274 The macro domain is an ADP-ribose binding module. EMBO J 2005;24:1911-1920.
19273270 Sensing NAD metabolites through macro domains. Front Biosci. 2009;14:3246-3258.

ATP13

PPR_long

PPR_3

PPR_2

PPR_1

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

Domain	Description	Evalue	Bits	GA	Start	End
ATP13	Mitochondrial ATPase expression	0.0039	6	26.70	94	127
PPR_1	PPR repeat	7.1E-07	18	23.80	106	128
PPR	PPR repeat	5.2E-09	25	25.00	106	132
PPR_2	PPR repeat family	5.8E-06	16	30.00	107	133
PPR_3	Pentatricopeptide repeat domain	8.3E-06	15	25.00	107	147
PPR_long	Pentacotripeptide-repeat region of PRORP	2.5E-08	22	27.00	117	216
PPR_1	PPR repeat	0.5	-1	23.80	136	144
PPR_2	PPR repeat family	2.3E-10	30	30.00	136	185
PPR	PPR repeat	0.00015	11	25.00	138	163
ATP13	Mitochondrial ATPase expression	0.23	0	26.70	143	175
PPR_3	Pentatricopeptide repeat domain	1.5E-08	24	25.00	168	218
PPR_1	PPR repeat	3.8E-11	32	23.80	169	201
PPR_2	PPR repeat family	1.7E-11	33	30.00	172	220
PPR	PPR repeat	3.4E-10	29	25.00	175	205
ATP13	Mitochondrial ATPase expression	0.69	-1	26.70	180	198
PPR_1	PPR repeat	2.9E-07	19	23.80	203	236
PPR_2	PPR repeat family	3.8E-10	29	30.00	209	249
PPR	PPR repeat	2E-09	26	25.00	211	240
PPR_3	Pentatricopeptide repeat domain	5.1E-08	22	25.00	233	288
PPR_long	Pentacotripeptide-repeat region of PRORP	3.2E-06	16	27.00	233	305
ATP13	Mitochondrial ATPase expression	0.28	0	26.70	245	301
PPR_2	PPR repeat family	6.7E-08	22	30.00	257	289
PPR	PPR repeat	0.13	2	25.00	259	273
PPR_1	PPR repeat	3.2E-09	25	23.80	273	302
PPR_2	PPR repeat family	3.8E-11	32	30.00	276	320
PPR	PPR repeat	2.6E-08	23	25.00	279	302
PPR_1	PPR repeat	1.1E-05	14	23.80	306	333
PPR_2	PPR repeat family	0.004	6	30.00	307	333
PPR	PPR repeat	0.0017	8	25.00	311	334
ATP13	Mitochondrial ATPase expression	0.21	1	26.70	340	358
PPR_3	Pentatricopeptide repeat domain	0.18	1	25.00	342	373
PPR_2	PPR repeat family	0.15	1	30.00	345	364
PPR	PPR repeat	0.072	3	25.00	351	365
PPR_1	PPR repeat	1	-2	23.80	353	363
Macro	Macro domain	5.1E-05	12	21.10	357	405