c2pfam

AT1G09340.1 :

Domain Description Evalue Bits GA Start End
adh_short short chain dehydrogenase 3.9E-06 15 20.50 54 123
RmlD_sub_bind RmlD substrate binding domain 4.6E-08 21 19.80 55 299
Epimerase NAD dependent epimerase/dehydratase family 6.8E-17 50 20.60 56 273
NmrA NmrA-like family 3.1E-05 12 20.60 56 135
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 4.4E-07 18 27.00 57 137
NAD_binding_10 NAD(P)H-binding 1.1E-11 34 27.20 60 212
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 1.3E-07 20 27.00 242 347

378

adh_short
RmlD_sub_bind
Epimerase
NmrA
GDP_Man_Dehyd
NAD_binding_10
GDP_Man_Dehyd

References:

adh_short
9735295 The refined crystal structure of Drosophila lebanonensis alcohol dehydrogenase at 1.9 A resolution. J Mol Biol 1998;282:383-399.
10387002 Structure of tropinone reductase-II complexed with NADP+ and pseudotropine at 1.9 A resolution: implication for stereospecific substrate binding and catalysis. Biochemistry 1999;38:7630-7637.

GDP_Man_Dehyd

Epimerase
9174344 Structural analysis of UDP-sugar binding to UDP-galactose 4-epimerase from Escherichia coli. Biochemistry 1997;36:6294-6304.

NmrA
11726498 The structure of the negative transcriptional regulator NmrA reveals a structural superfamily which includes the short-chain dehydrogenase/reductases. EMBO J 2001;20:6619-6626.

NAD_binding_10

RmlD_sub_bind
12057193 Variation on a Theme of SDR. dTDP-6-Deoxy-L- lyxo-4-Hexulose Reductase (RmlD) Shows a New Mg(2+)-Dependent Dimerization Mode. Structure (Camb) 2002;10:773-786.
10802738 RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class of epimerase. Nat Struct Biol 2000;7:398-402.

Domain	Description	Evalue	Bits	GA	Start	End
adh_short	short chain dehydrogenase	3.9E-06	15	20.50	54	123
RmlD_sub_bind	RmlD substrate binding domain	4.6E-08	21	19.80	55	299
Epimerase	NAD dependent epimerase/dehydratase family	6.8E-17	50	20.60	56	273
NmrA	NmrA-like family	3.1E-05	12	20.60	56	135
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	4.4E-07	18	27.00	57	137
NAD_binding_10	NAD(P)H-binding	1.1E-11	34	27.20	60	212
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	1.3E-07	20	27.00	242	347