c2pfam

AT2G19385.1 :

Domain Description Evalue Bits GA Start End
zf-ACC Acetyl-coA carboxylase zinc finger domain 5.4E-05 13 24.20 3 25
zf_UBZ Ubiquitin-Binding Zinc Finger 0.00014 12 25.60 4 21
zf-LYAR LYAR-type C2HC zinc finger 0.035 4 20.70 4 21
zf-C2H2_4 C2H2-type zinc finger 0.068 4 27.00 4 16
zf-C2H2 Zinc finger, C2H2 type 0.0038 8 20.80 4 16
DUF5816 Family of unknown function (DUF5816) 0.27 2 26.90 4 15
DZR Double zinc ribbon 0.0012 9 27.30 5 39
zf-dskA_traR Prokaryotic dksA/traR C4-type zinc finger 0.012 6 21.00 6 11
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 0.45 1 26.90 22 47
zf-LYAR LYAR-type C2HC zinc finger 3.1E-17 52 20.70 30 57
zf_UBZ Ubiquitin-Binding Zinc Finger 0.19 1 25.60 30 48
zf-dskA_traR Prokaryotic dksA/traR C4-type zinc finger 0.019 5 21.00 31 38
zf-C2H2_4 C2H2-type zinc finger 0.26 3 27.00 31 47
FYDLN_acid Protein of unknown function (FYDLN_acid) 0.014 6 22.70 31 82
zf-ACC Acetyl-coA carboxylase zinc finger domain 0.1 3 24.20 32 40
DUF5816 Family of unknown function (DUF5816) 0.0029 8 26.90 90 106
FYDLN_acid Protein of unknown function (FYDLN_acid) 0.2 2 22.70 91 170
zf_C2H2_ZHX Zinc-fingers and homeoboxes C2H2 finger domain 0.00082 9 27.00 95 138
zf-C2H2_2 C2H2 type zinc-finger (2 copies) 0.00024 11 26.90 95 124
zf_UBZ Ubiquitin-Binding Zinc Finger 0.2 1 25.60 95 115
zf-met Zinc-finger of C2H2 type 1.8E-10 31 21.20 95 119
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding 4.4E-06 17 22.60 95 120
zf-C2H2_4 C2H2-type zinc finger 0.0053 8 27.00 96 113
DZR Double zinc ribbon 0.09 3 27.30 96 105
zf-C2H2 Zinc finger, C2H2 type 0.049 4 20.80 97 113
DUF4778 Domain of unknown function (DUF4778) 8.5E-05 13 27.00 104 237

275

zf-ACC
zf_UBZ
zf-LYAR
zf-C2H2_4
zf-C2H2
DUF5816
DZR
zf-dskA_traR
zf-C2H2_2
zf-LYAR
zf_UBZ
zf-dskA_traR
zf-C2H2_4
FYDLN_acid
zf-ACC
DUF5816
FYDLN_acid
zf_C2H2_ZHX
zf-C2H2_2
zf_UBZ
zf-met
zf-C2H2_jaz
zf-C2H2_4
DZR
zf-C2H2
DUF4778

References:

FYDLN_acid

zf_C2H2_ZHX

zf-met

zf-LYAR
8491376 LYAR, a novel nucleolar protein with zinc finger DNA-binding motifs, is involved in cell growth regulation. Genes Dev. 1993;7:735-748.

zf-C2H2_jaz
10488071 JAZ requires the double-stranded RNA-binding zinc finger motifs for nuclear localization. J Biol Chem. 1999;274:27399-27406.

zf-C2H2
9171100 Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins. Nucleic Acids Res 1997;25:2464-2469.
12683994 Assessment by molecular dynamics simulations of the structural determinants of DNA-binding specificity for transcription factor Sp1. J Mol Biol 2003;328:9-32.

zf-C2H2_4

zf-C2H2_2

zf-dskA_traR

zf-ACC

DUF4778

DUF5816

DZR

zf_UBZ

Domain	Description	Evalue	Bits	GA	Start	End
zf-ACC	Acetyl-coA carboxylase zinc finger domain	5.4E-05	13	24.20	3	25
zf_UBZ	Ubiquitin-Binding Zinc Finger	0.00014	12	25.60	4	21
zf-LYAR	LYAR-type C2HC zinc finger	0.035	4	20.70	4	21
zf-C2H2_4	C2H2-type zinc finger	0.068	4	27.00	4	16
zf-C2H2	Zinc finger, C2H2 type	0.0038	8	20.80	4	16
DUF5816	Family of unknown function (DUF5816)	0.27	2	26.90	4	15
DZR	Double zinc ribbon	0.0012	9	27.30	5	39
zf-dskA_traR	Prokaryotic dksA/traR C4-type zinc finger	0.012	6	21.00	6	11
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	0.45	1	26.90	22	47
zf-LYAR	LYAR-type C2HC zinc finger	3.1E-17	52	20.70	30	57
zf_UBZ	Ubiquitin-Binding Zinc Finger	0.19	1	25.60	30	48
zf-dskA_traR	Prokaryotic dksA/traR C4-type zinc finger	0.019	5	21.00	31	38
zf-C2H2_4	C2H2-type zinc finger	0.26	3	27.00	31	47
FYDLN_acid	Protein of unknown function (FYDLN_acid)	0.014	6	22.70	31	82
zf-ACC	Acetyl-coA carboxylase zinc finger domain	0.1	3	24.20	32	40
DUF5816	Family of unknown function (DUF5816)	0.0029	8	26.90	90	106
FYDLN_acid	Protein of unknown function (FYDLN_acid)	0.2	2	22.70	91	170
zf_C2H2_ZHX	Zinc-fingers and homeoboxes C2H2 finger domain	0.00082	9	27.00	95	138
zf-C2H2_2	C2H2 type zinc-finger (2 copies)	0.00024	11	26.90	95	124
zf_UBZ	Ubiquitin-Binding Zinc Finger	0.2	1	25.60	95	115
zf-met	Zinc-finger of C2H2 type	1.8E-10	31	21.20	95	119
zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	4.4E-06	17	22.60	95	120
zf-C2H2_4	C2H2-type zinc finger	0.0053	8	27.00	96	113
DZR	Double zinc ribbon	0.09	3	27.30	96	105
zf-C2H2	Zinc finger, C2H2 type	0.049	4	20.80	97	113
DUF4778	Domain of unknown function (DUF4778)	8.5E-05	13	27.00	104	237