c2pfam

AT1G01830.1 :

Domain Description Evalue Bits GA Start End
ApoLp-III Apolipophorin-III precursor (apoLp-III) 2.1E-06 17 31.00 17 126
Dynactin_p22 Dynactin subunit p22 1.6E-05 14 20.90 23 129
YscO Type III secretion protein YscO 0.0042 6 22.50 23 69
YscO Type III secretion protein YscO 0.14 1 22.50 82 114
Dynactin_p22 Dynactin subunit p22 0.46 0 20.90 160 186
Arm_2 Armadillo-like 3.9E-05 12 20.40 211 369
HEAT_EZ HEAT-like repeat 0.085 3 27.00 211 236
HEAT_2 HEAT repeats 0.00015 12 27.70 211 275
Arm Armadillo/beta-catenin-like repeat 0.0014 8 20.60 212 238
HEAT_2 HEAT repeats 0.00023 11 27.70 213 278
HEAT HEAT repeat 0.00072 9 23.50 214 239
SAM_Exu Exuperantia SAM-like domain 0.0087 6 28.90 222 242
HEAT_EZ HEAT-like repeat 6.4E-05 13 27.00 225 278
Arm Armadillo/beta-catenin-like repeat 7.2E-08 22 20.60 245 279
HEAT HEAT repeat 0.08 3 23.50 252 278
HEAT_2 HEAT repeats 0.036 4 27.70 254 321
Arm Armadillo/beta-catenin-like repeat 6.3E-07 19 20.60 282 321
SAM_Exu Exuperantia SAM-like domain 0.028 4 28.90 321 334
Arm Armadillo/beta-catenin-like repeat 0.03 4 20.60 323 362
Arm Armadillo/beta-catenin-like repeat 0.00077 9 20.60 366 401
HEAT_2 HEAT repeats 0.079 3 27.70 379 440
Arm Armadillo/beta-catenin-like repeat 1.6E-05 14 20.60 404 439
HEAT HEAT repeat 0.45 1 23.50 415 442
HEAT_2 HEAT repeats 1.6E-05 15 27.70 422 522
Arm_2 Armadillo-like 0.16 1 20.40 431 487
HEAT_EZ HEAT-like repeat 0.024 5 27.00 433 479
Arm Armadillo/beta-catenin-like repeat 2.3E-08 23 20.60 444 482
HEAT HEAT repeat 0.00015 12 23.50 457 483
HEAT_EZ HEAT-like repeat 0.014 5 27.00 471 525

574

ApoLp-III
Dynactin_p22
YscO
YscO
Dynactin_p22
Arm_2
HEAT_EZ
HEAT_2
Arm
HEAT_2
HEAT
SAM_Exu
HEAT_EZ
Arm
HEAT
HEAT_2
Arm
SAM_Exu
Arm
Arm
HEAT_2
Arm
HEAT
HEAT_2
Arm_2
HEAT_EZ
Arm
HEAT
HEAT_EZ

References:

HEAT_2

Dynactin_p22
9722614 Characterization of the p22 subunit of dynactin reveals the localization of cytoplasmic dynein and dynactin to the midbody of dividing cells. J Cell Biol 1998;142:1023-1034.

SAM_Exu

Arm
9298899 Three-dimensional structure of the armadillo repeat region of beta-catenin. Cell 1997;90:871-882.
8573337 Signal transduction of beta-catenin. Curr Opin Cell Biol 1995;7:634-640.
9309175 Armadillo and dTCF: a marriage made in the nucleus. Curr Opin Genet Dev 1997;7:459-466.
8259519 Association of the APC tumor suppressor protein with catenins. Science 1993;262:1734-1737.
8259518 Association of the APC gene product with beta-catenin. Science 1993;262:1731-1734.
2261639 The segment polarity gene armadillo encodes a functionally modular protein that is the Drosophila homolog of human plakoglobin. Cell 1990;63:1167-1176.

HEAT
7550332 HEAT repeats in the Huntington's disease protein. Nat Genet 1995;11:115-116.
9989501 The structure of the protein phosphatase 2A PR65/A subunit reveals the conformation of its 15 tandemly repeated HEAT motifs. Cell 1999;96:99-110.

Arm_2

ApoLp-III
11818551 Structural basis for the conformational adaptability of apolipophorin III, a helix-bundle exchangeable apolipoprotein. Proc Natl Acad Sci U S A 2002;99:1188-1193.

YscO
9683485 YscO of Yersinia pestis is a mobile core component of the Yop secretion system. J Bacteriol 1998;180:3882-3890.

HEAT_EZ

Domain	Description	Evalue	Bits	GA	Start	End
ApoLp-III	Apolipophorin-III precursor (apoLp-III)	2.1E-06	17	31.00	17	126
Dynactin_p22	Dynactin subunit p22	1.6E-05	14	20.90	23	129
YscO	Type III secretion protein YscO	0.0042	6	22.50	23	69
YscO	Type III secretion protein YscO	0.14	1	22.50	82	114
Dynactin_p22	Dynactin subunit p22	0.46	0	20.90	160	186
Arm_2	Armadillo-like	3.9E-05	12	20.40	211	369
HEAT_EZ	HEAT-like repeat	0.085	3	27.00	211	236
HEAT_2	HEAT repeats	0.00015	12	27.70	211	275
Arm	Armadillo/beta-catenin-like repeat	0.0014	8	20.60	212	238
HEAT_2	HEAT repeats	0.00023	11	27.70	213	278
HEAT	HEAT repeat	0.00072	9	23.50	214	239
SAM_Exu	Exuperantia SAM-like domain	0.0087	6	28.90	222	242
HEAT_EZ	HEAT-like repeat	6.4E-05	13	27.00	225	278
Arm	Armadillo/beta-catenin-like repeat	7.2E-08	22	20.60	245	279
HEAT	HEAT repeat	0.08	3	23.50	252	278
HEAT_2	HEAT repeats	0.036	4	27.70	254	321
Arm	Armadillo/beta-catenin-like repeat	6.3E-07	19	20.60	282	321
SAM_Exu	Exuperantia SAM-like domain	0.028	4	28.90	321	334
Arm	Armadillo/beta-catenin-like repeat	0.03	4	20.60	323	362
Arm	Armadillo/beta-catenin-like repeat	0.00077	9	20.60	366	401
HEAT_2	HEAT repeats	0.079	3	27.70	379	440
Arm	Armadillo/beta-catenin-like repeat	1.6E-05	14	20.60	404	439
HEAT	HEAT repeat	0.45	1	23.50	415	442
HEAT_2	HEAT repeats	1.6E-05	15	27.70	422	522
Arm_2	Armadillo-like	0.16	1	20.40	431	487
HEAT_EZ	HEAT-like repeat	0.024	5	27.00	433	479
Arm	Armadillo/beta-catenin-like repeat	2.3E-08	23	20.60	444	482
HEAT	HEAT repeat	0.00015	12	23.50	457	483
HEAT_EZ	HEAT-like repeat	0.014	5	27.00	471	525