c2pfam

AT2G22540.1 :

Domain Description Evalue Bits GA Start End
SRF-TF SRF-type transcription factor (DNA-binding and dimerisation domain) 4.7E-29 89 20.40 10 57
Sipho_Gp157 Siphovirus Gp157 0.05 3 22.20 60 96
CtIP_N Tumour-suppressor protein CtIP N-terminal domain 0.0019 8 21.60 70 183
NRBF2 Nuclear receptor-binding factor 2, autophagy regulator 0.3 0 36.80 72 93
K-box K-box region 1.3E-19 60 20.60 92 170
Sipho_Gp157 Siphovirus Gp157 3.7E-05 13 22.20 118 192
YabA Initiation control protein YabA 0.0018 8 30.00 140 206
ZapB Cell division protein ZapB 2.5E-06 17 31.20 140 181
GIT_CC GIT coiled-coil Rho guanine nucleotide exchange factor 0.00035 10 28.30 145 170
NRBF2 Nuclear receptor-binding factor 2, autophagy regulator 2.3E-06 17 36.80 146 185
bZIP_2 Basic region leucine zipper 0.00035 10 21.30 152 177
K-box K-box region 0.19 1 20.60 166 183

240

SRF-TF
Sipho_Gp157
CtIP_N
NRBF2
K-box
Sipho_Gp157
YabA
ZapB
GIT_CC
NRBF2
bZIP_2
K-box

References:

SRF-TF

GIT_CC

YabA

NRBF2

Sipho_Gp157
9792848 A short noncoding viral DNA element showing characteristics of a replication origin confers bacteriophage resistance to Streptococcus thermophilus. Virology 1998;250:377-387.

bZIP_2
11906833 bZIP transcription factors in Arabidopsis. Trends Plant Sci 2002;7:106-111.
12867624 bZIP proteins of human gammaherpesviruses. J Gen Virol 2003;84:1941-1949.
7780801 Transcription factors 1: bZIP proteins. Protein Profile 1995;2:101-168.

K-box
7958839 Function and regulation of the Arabidopsis floral homeotic gene PISTILLATA. Genes Dev 1994;8:1548-1560.
2031185 Predicting coiled coils from protein sequences. Science 1991;252:1162-1164.

CtIP_N
9738006 The C-terminal (BRCT) domains of BRCA1 interact in vivo with CtIP, a protein implicated in the CtBP pathway of transcriptional repression. J Biol Chem. 1998;273:25388-25392.
18007598 A novel plant gene essential for meiosis is related to the human CtIP and the yeast COM1/SAE2 gene. EMBO J. 2007; [Epub ahead of print]
17936710 Ctp1 is a cell-cycle-regulated protein that functions with Mre11 complex to control double-strand break repair by homologous recombination. Mol Cell. 2007;28:134-146.

ZapB

Domain	Description	Evalue	Bits	GA	Start	End
SRF-TF	SRF-type transcription factor (DNA-binding and dimerisation domain)	4.7E-29	89	20.40	10	57
Sipho_Gp157	Siphovirus Gp157	0.05	3	22.20	60	96
CtIP_N	Tumour-suppressor protein CtIP N-terminal domain	0.0019	8	21.60	70	183
NRBF2	Nuclear receptor-binding factor 2, autophagy regulator	0.3	0	36.80	72	93
K-box	K-box region	1.3E-19	60	20.60	92	170
Sipho_Gp157	Siphovirus Gp157	3.7E-05	13	22.20	118	192
YabA	Initiation control protein YabA	0.0018	8	30.00	140	206
ZapB	Cell division protein ZapB	2.5E-06	17	31.20	140	181
GIT_CC	GIT coiled-coil Rho guanine nucleotide exchange factor	0.00035	10	28.30	145	170
NRBF2	Nuclear receptor-binding factor 2, autophagy regulator	2.3E-06	17	36.80	146	185
bZIP_2	Basic region leucine zipper	0.00035	10	21.30	152	177
K-box	K-box region	0.19	1	20.60	166	183