c2pfam

AT2G22620.1 :

Domain Description Evalue Bits GA Start End
Rhamnogal_lyase Rhamnogalacturonate lyase family 0 377 19.90 34 243
RhgB_N Rhamnogalacturonase B, N-terminal 1.4E-05 14 20.70 240 314
fn3_3 Polysaccharide lyase family 4, domain II 3.6E-27 83 24.40 399 469
CarboxypepD_reg Carboxypeptidase regulatory-like domain 1.7E-06 17 32.30 416 469
CarbopepD_reg_2 CarboxypepD_reg-like domain 0.00029 10 32.20 418 469
DUF2012 Protein of unknown function (DUF2012) 0.0018 7 24.30 420 445
CBM-like Polysaccharide lyase family 4, domain III 0 185 27.00 483 671
CarboxypepD_reg Carboxypeptidase regulatory-like domain 0.39 0 32.30 573 603
DUF2012 Protein of unknown function (DUF2012) 0.077 2 24.30 573 606
CarbopepD_reg_2 CarboxypepD_reg-like domain 0.044 3 32.20 573 607

677

Rhamnogal_lyase
RhgB_N
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
DUF2012
CBM-like
CarboxypepD_reg
DUF2012
CarbopepD_reg_2

References:

RhgB_N
15135077 Rhamnogalacturonan lyase reveals a unique three-domain modular structure for polysaccharide lyase family 4. FEBS Lett. 2004;565:188-194.

fn3_3

Rhamnogal_lyase
12591882 Rhamnogalacturonate lyase RhiE is secreted by the out system in Erwinia chrysanthemi. J Bacteriol 2003;185:1642-1649.

DUF2012

CarboxypepD_reg

CarbopepD_reg_2

CBM-like

Domain	Description	Evalue	Bits	GA	Start	End
Rhamnogal_lyase	Rhamnogalacturonate lyase family	0	377	19.90	34	243
RhgB_N	Rhamnogalacturonase B, N-terminal	1.4E-05	14	20.70	240	314
fn3_3	Polysaccharide lyase family 4, domain II	3.6E-27	83	24.40	399	469
CarboxypepD_reg	Carboxypeptidase regulatory-like domain	1.7E-06	17	32.30	416	469
CarbopepD_reg_2	CarboxypepD_reg-like domain	0.00029	10	32.20	418	469
DUF2012	Protein of unknown function (DUF2012)	0.0018	7	24.30	420	445
CBM-like	Polysaccharide lyase family 4, domain III	0	185	27.00	483	671
CarboxypepD_reg	Carboxypeptidase regulatory-like domain	0.39	0	32.30	573	603
DUF2012	Protein of unknown function (DUF2012)	0.077	2	24.30	573	606
CarbopepD_reg_2	CarboxypepD_reg-like domain	0.044	3	32.20	573	607