c2pfam

AT2G23810.1 :

Domain Description Evalue Bits GA Start End
Tetraspanin Tetraspanin family 1.2E-37 120 32.10 7 255
ABC2_membrane_2 ABC-2 family transporter protein 5.1E-06 16 27.20 8 254
DUF4064 Protein of unknown function (DUF4064) 0.004 7 32.10 30 64
CitMHS Citrate transporter 0.00044 9 20.10 44 124
DUF2207 Predicted membrane protein (DUF2207) 7.7E-07 18 23.00 45 135
DUF1772 Domain of unknown function (DUF1772) 1.8E-06 18 23.00 45 138
Neur_chan_memb Neurotransmitter-gated ion-channel transmembrane region 4.5E-05 14 23.10 47 252
2TM 2TM domain 0.00017 12 24.80 49 111
FA_desaturase Fatty acid desaturase 0.00031 11 24.90 49 133
SUR7 SUR7/PalI family 4.5E-06 16 24.10 51 99
WBP-1 WW domain-binding protein 1 0.00022 12 21.30 64 92
DUF4064 Protein of unknown function (DUF4064) 0.15 2 32.10 69 93
DUF3139 Protein of unknown function (DUF3139) 0.0029 8 25.50 75 100
Cadherin_C_2 Cadherin cytoplasmic C-terminal 0.057 4 31.50 76 157
OAD_gamma Oxaloacetate decarboxylase, gamma chain 5.6E-05 14 21.20 76 106
SUR7 SUR7/PalI family 0.62 -1 24.10 181 261
DUF4064 Protein of unknown function (DUF4064) 0.037 4 32.10 217 261
DUF1772 Domain of unknown function (DUF1772) 0.36 1 23.00 228 260
DUF2207 Predicted membrane protein (DUF2207) 0.021 3 23.00 230 265
DUF3139 Protein of unknown function (DUF3139) 0.047 4 25.50 232 262
Cadherin_C_2 Cadherin cytoplasmic C-terminal 0.00056 11 31.50 234 263
2TM 2TM domain 0.62 0 24.80 234 248
OAD_gamma Oxaloacetate decarboxylase, gamma chain 0.3 2 21.20 239 254
WBP-1 WW domain-binding protein 1 0.05 4 21.30 239 260

273

Tetraspanin
ABC2_membrane_2
DUF4064
CitMHS
DUF2207
DUF1772
Neur_chan_memb
2TM
FA_desaturase
SUR7
WBP-1
DUF4064
DUF3139
Cadherin_C_2
OAD_gamma
SUR7
DUF4064
DUF1772
DUF2207
DUF3139
Cadherin_C_2
2TM
OAD_gamma
WBP-1

References:

DUF3139

WBP-1
7641887 Characterization of a novel protein-binding module--the WW domain. FEBS Lett 1995;369:67-71.

DUF1772

Cadherin_C_2

SUR7
9219339 Cloning of the multicopy suppressor gene SUR7: evidence for a functional relationship between the yeast actin-binding protein Rvs167 and a putative membranous protein. Yeast 1997;13:747-761.
11784867 The Sur7p family defines novel cortical domains in Saccharomyces cerevisiae, affects sphingolipid metabolism, and is involved in sporulation. Mol Cell Biol 2002;22:927-934.
16496001 Eisosomes mark static sites of endocytosis. Nature. 2006;439:998-1003.
9791171 Putative membrane components of signal transduction pathways for ambient pH regulation in Aspergillus and meiosis in saccharomyces are homologous. Mol Microbiol. 1998;30:259-264.

OAD_gamma
11802728 Subunit gamma of the oxaloacetate decarboxylase Na(+) pump: interaction with other subunits/domains of the complex and binding site for the Zn(2+) metal ion. Biochemistry 2002;41:1285-1292.

CitMHS

Neur_chan_memb

DUF4064

FA_desaturase
8861937 Crystal structure of delta9 stearoyl-acyl carrier protein desaturase from castor seed and its relationship to other di-iron proteins. EMBO J 1996;15:4081-4092.

Tetraspanin

2TM

ABC2_membrane_2

DUF2207

Domain	Description	Evalue	Bits	GA	Start	End
Tetraspanin	Tetraspanin family	1.2E-37	120	32.10	7	255
ABC2_membrane_2	ABC-2 family transporter protein	5.1E-06	16	27.20	8	254
DUF4064	Protein of unknown function (DUF4064)	0.004	7	32.10	30	64
CitMHS	Citrate transporter	0.00044	9	20.10	44	124
DUF2207	Predicted membrane protein (DUF2207)	7.7E-07	18	23.00	45	135
DUF1772	Domain of unknown function (DUF1772)	1.8E-06	18	23.00	45	138
Neur_chan_memb	Neurotransmitter-gated ion-channel transmembrane region	4.5E-05	14	23.10	47	252
2TM	2TM domain	0.00017	12	24.80	49	111
FA_desaturase	Fatty acid desaturase	0.00031	11	24.90	49	133
SUR7	SUR7/PalI family	4.5E-06	16	24.10	51	99
WBP-1	WW domain-binding protein 1	0.00022	12	21.30	64	92
DUF4064	Protein of unknown function (DUF4064)	0.15	2	32.10	69	93
DUF3139	Protein of unknown function (DUF3139)	0.0029	8	25.50	75	100
Cadherin_C_2	Cadherin cytoplasmic C-terminal	0.057	4	31.50	76	157
OAD_gamma	Oxaloacetate decarboxylase, gamma chain	5.6E-05	14	21.20	76	106
SUR7	SUR7/PalI family	0.62	-1	24.10	181	261
DUF4064	Protein of unknown function (DUF4064)	0.037	4	32.10	217	261
DUF1772	Domain of unknown function (DUF1772)	0.36	1	23.00	228	260
DUF2207	Predicted membrane protein (DUF2207)	0.021	3	23.00	230	265
DUF3139	Protein of unknown function (DUF3139)	0.047	4	25.50	232	262
Cadherin_C_2	Cadherin cytoplasmic C-terminal	0.00056	11	31.50	234	263
2TM	2TM domain	0.62	0	24.80	234	248
OAD_gamma	Oxaloacetate decarboxylase, gamma chain	0.3	2	21.20	239	254
WBP-1	WW domain-binding protein 1	0.05	4	21.30	239	260