c2pfam

AT2G25580.1 :

Domain Description Evalue Bits GA Start End
PPR_2 PPR repeat family 0.16 1 30.00 143 169
PPR PPR repeat 0.72 -1 25.00 145 165
PPR_1 PPR repeat 0.22 0 23.80 179 185
PPR_1 PPR repeat 0.00024 9 23.80 227 239
PPR PPR repeat 0.0018 7 25.00 227 239
PPR_2 PPR repeat family 0.02 4 30.00 227 239
PPR_3 Pentatricopeptide repeat domain 0.011 4 25.00 294 320
PPR PPR repeat 1.7E-05 14 25.00 294 319
PPR_2 PPR repeat family 0.00023 10 30.00 295 321
PPR_1 PPR repeat 0.012 4 23.80 299 316
PPR_1 PPR repeat 0.00062 8 23.80 319 344
PPR_2 PPR repeat family 4E-05 12 30.00 319 354
PPR_3 Pentatricopeptide repeat domain 0.058 2 25.00 319 355
PPR PPR repeat 1E-08 24 25.00 322 350
PPR PPR repeat 0.015 4 25.00 363 383
PPR_2 PPR repeat family 0.72 -1 30.00 368 391
PPR_3 Pentatricopeptide repeat domain 7E-06 15 25.00 384 432
PPR_1 PPR repeat 0.00038 9 23.80 386 417
PPR PPR repeat 0.0054 6 25.00 394 418
DYW_deaminase DYW family of nucleic acid deaminases 4.9E-32 99 31.60 487 604

615

PPR_2
PPR
PPR_1
PPR_1
PPR
PPR_2
PPR_3
PPR
PPR_2
PPR_1
PPR_1
PPR_2
PPR_3
PPR
PPR
PPR_2
PPR_3
PPR_1
PPR
DYW_deaminase

References:

PPR_1

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

DYW_deaminase

PPR_3

PPR_2

Domain	Description	Evalue	Bits	GA	Start	End
PPR_2	PPR repeat family	0.16	1	30.00	143	169
PPR	PPR repeat	0.72	-1	25.00	145	165
PPR_1	PPR repeat	0.22	0	23.80	179	185
PPR_1	PPR repeat	0.00024	9	23.80	227	239
PPR	PPR repeat	0.0018	7	25.00	227	239
PPR_2	PPR repeat family	0.02	4	30.00	227	239
PPR_3	Pentatricopeptide repeat domain	0.011	4	25.00	294	320
PPR	PPR repeat	1.7E-05	14	25.00	294	319
PPR_2	PPR repeat family	0.00023	10	30.00	295	321
PPR_1	PPR repeat	0.012	4	23.80	299	316
PPR_1	PPR repeat	0.00062	8	23.80	319	344
PPR_2	PPR repeat family	4E-05	12	30.00	319	354
PPR_3	Pentatricopeptide repeat domain	0.058	2	25.00	319	355
PPR	PPR repeat	1E-08	24	25.00	322	350
PPR	PPR repeat	0.015	4	25.00	363	383
PPR_2	PPR repeat family	0.72	-1	30.00	368	391
PPR_3	Pentatricopeptide repeat domain	7E-06	15	25.00	384	432
PPR_1	PPR repeat	0.00038	9	23.80	386	417
PPR	PPR repeat	0.0054	6	25.00	394	418
DYW_deaminase	DYW family of nucleic acid deaminases	4.9E-32	99	31.60	487	604