c2pfam

AT2G26730.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 2.3E-10 31 20.70 27 62
LRR_8 Leucine rich repeat 1.3E-11 34 27.00 68 126
LRR_4 Leucine Rich repeats (2 copies) 2.5E-08 24 27.00 91 127
LRR_6 Leucine Rich repeat 0.14 3 23.40 93 105
LRR_1 Leucine Rich Repeat 0.00079 10 20.60 93 114
LRR_6 Leucine Rich repeat 0.0025 8 23.40 114 130
LRR_1 Leucine Rich Repeat 0.0043 8 20.60 116 136
LRR_8 Leucine rich repeat 1.2E-06 18 27.00 132 174
LRR_6 Leucine Rich repeat 0.015 6 23.40 139 153
LRR_4 Leucine Rich repeats (2 copies) 2.2E-06 18 27.00 140 180
LRR_8 Leucine rich repeat 0.42 1 27.00 186 206
Rax2 Cortical protein marker for cell polarity 4.7E-06 16 27.80 228 289
TMEM51 Transmembrane protein 51 4.9E-06 16 25.50 233 292
DUF4690 Small Novel Rich in Cartilage 0.00015 12 30.70 243 283
CD34_antigen CD34/Podocalyxin family 1.5E-06 18 21.90 247 290
CBP_BcsF Cellulose biosynthesis protein BcsF 8.7E-05 13 21.90 258 304
EphA2_TM Ephrin type-A receptor 2 transmembrane domain 0.00016 12 28.90 261 301
Pkinase Protein kinase domain 0 130 20.40 354 614
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 125 23.10 355 614
ABC1 ABC1 family 8.7E-05 13 20.60 355 389

658

LRRNT_2
LRR_8
LRR_4
LRR_6
LRR_1
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_8
Rax2
TMEM51
DUF4690
CD34_antigen
CBP_BcsF
EphA2_TM
Pkinase
PK_Tyr_Ser-Thr
ABC1

References:

CD34_antigen
1694174 Activated protein kinase C directly phosphorylates the CD34 antigen on hematopoietic cells. J Biol Chem 1990;265:11056-11061.
10982412 Expression of podocalyxin inhibits cell-cell adhesion and modifies junctional properties in Madin-Darby canine kidney cells. Mol Biol Cell 2000;11:3219-3232.
10722749 Identification of endoglycan, a member of the CD34/podocalyxin family of sialomucins. J Biol Chem 2000;275:9001-9010.

Rax2

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_8

LRR_6

LRR_4

DUF4690

CBP_BcsF

PK_Tyr_Ser-Thr

TMEM51

EphA2_TM

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	2.3E-10	31	20.70	27	62
LRR_8	Leucine rich repeat	1.3E-11	34	27.00	68	126
LRR_4	Leucine Rich repeats (2 copies)	2.5E-08	24	27.00	91	127
LRR_6	Leucine Rich repeat	0.14	3	23.40	93	105
LRR_1	Leucine Rich Repeat	0.00079	10	20.60	93	114
LRR_6	Leucine Rich repeat	0.0025	8	23.40	114	130
LRR_1	Leucine Rich Repeat	0.0043	8	20.60	116	136
LRR_8	Leucine rich repeat	1.2E-06	18	27.00	132	174
LRR_6	Leucine Rich repeat	0.015	6	23.40	139	153
LRR_4	Leucine Rich repeats (2 copies)	2.2E-06	18	27.00	140	180
LRR_8	Leucine rich repeat	0.42	1	27.00	186	206
Rax2	Cortical protein marker for cell polarity	4.7E-06	16	27.80	228	289
TMEM51	Transmembrane protein 51	4.9E-06	16	25.50	233	292
DUF4690	Small Novel Rich in Cartilage	0.00015	12	30.70	243	283
CD34_antigen	CD34/Podocalyxin family	1.5E-06	18	21.90	247	290
CBP_BcsF	Cellulose biosynthesis protein BcsF	8.7E-05	13	21.90	258	304
EphA2_TM	Ephrin type-A receptor 2 transmembrane domain	0.00016	12	28.90	261	301
Pkinase	Protein kinase domain	0	130	20.40	354	614
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	125	23.10	355	614
ABC1	ABC1 family	8.7E-05	13	20.60	355	389