c2pfam

AT2G27040.1 :

Domain Description Evalue Bits GA Start End
ArgoN N-terminal domain of argonaute 3.8E-32 100 30.90 67 228
ArgoL1 Argonaute linker 1 domain 1.2E-17 52 20.90 240 289
PAZ PAZ domain 7.9E-30 92 20.80 294 424
ArgoL2 Argonaute linker 2 domain 1E-17 53 33.30 434 479
ArgoMid Mid domain of argonaute 4.7E-10 29 27.50 488 542
Piwi Piwi domain 0 367 19.90 577 885

924

ArgoN
ArgoL1
PAZ
ArgoL2
ArgoMid
Piwi

References:

PAZ
11050429 Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain. Trends Biochem Sci 2000;25:481-482.
14625589 The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes. Nat Struct Biol 2003;10:1026-1032.
14615802 Structure and conserved RNA binding of the PAZ domain. Nature 2003;426:468-474.
14615801 Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain. Nature 2003;426:465-469.

ArgoN

ArgoMid

ArgoL2

ArgoL1

Piwi
11050429 Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain. Trends Biochem Sci 2000;25:481-482.
15284453 Crystal structure of Argonaute and its implications for RISC slicer activity. Science 2004;305:1434-1437.

Domain	Description	Evalue	Bits	GA	Start	End
ArgoN	N-terminal domain of argonaute	3.8E-32	100	30.90	67	228
ArgoL1	Argonaute linker 1 domain	1.2E-17	52	20.90	240	289
PAZ	PAZ domain	7.9E-30	92	20.80	294	424
ArgoL2	Argonaute linker 2 domain	1E-17	53	33.30	434	479
ArgoMid	Mid domain of argonaute	4.7E-10	29	27.50	488	542
Piwi	Piwi domain	0	367	19.90	577	885