c2pfam

AT2G27660.1 :

Domain Description Evalue Bits GA Start End
C1_2 C1 domain 1.6E-15 46 20.40 15 59
zf-HC5HC2H_2 PHD-zinc-finger like domain 0.00065 9 27.00 23 70
zf-HC5HC2H PHD-like zinc-binding domain 0.00085 9 29.10 28 67
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 8.6E-05 11 27.30 31 60
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 6.7E-05 12 26.00 31 60
PHD PHD-finger 2.9E-05 13 27.90 32 63
Zf_RING KIAA1045 RING finger 0.00023 11 30.80 32 64
ZZ Zinc finger, ZZ type 0.013 5 21.20 32 59
C1_2 C1 domain 5.9E-15 45 20.40 68 116
ZZ Zinc finger, ZZ type 0.00088 8 21.20 88 111
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.0027 7 27.30 89 118
zf-HC5HC2H PHD-like zinc-binding domain 0.013 5 29.10 89 126
zf-HC5HC2H_2 PHD-zinc-finger like domain 0.0068 6 27.00 90 121
Zf_RING KIAA1045 RING finger 9.7E-05 12 30.80 90 155
PHD PHD-finger 0.0068 6 27.90 90 120
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 0.0057 6 26.00 98 116
C1_2 C1 domain 4.3E-12 35 20.40 125 175
ZZ Zinc finger, ZZ type 0.002 7 21.20 144 167
zf-HC5HC2H PHD-like zinc-binding domain 0.13 2 29.10 146 174
zf-HC5HC2H_2 PHD-zinc-finger like domain 0.43 0 27.00 147 176
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.11 1 27.30 147 175
C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain) 0.00015 11 26.00 147 176
Zf_RING KIAA1045 RING finger 0.044 3 30.80 147 175
PHD PHD-finger 0.0012 8 27.90 148 178

718

C1_2
zf-HC5HC2H_2
zf-HC5HC2H
Zn_ribbon_17
C1_1
PHD
Zf_RING
ZZ
C1_2
ZZ
Zn_ribbon_17
zf-HC5HC2H
zf-HC5HC2H_2
Zf_RING
PHD
C1_1
C1_2
ZZ
zf-HC5HC2H
zf-HC5HC2H_2
Zn_ribbon_17
C1_1
Zf_RING
PHD

References:

Zf_RING

Zn_ribbon_17

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

ZZ
8848831 ZZ and TAZ: new putative zinc fingers in dystrophin and other proteins. Trends Biochem Sci 1996;21:11-13.
11305946 Dystrophins and dystrobrevins. Genome Biol 2001;2:REVIEWS3006.

zf-HC5HC2H_2

zf-HC5HC2H

C1_2

C1_1
1862342 Crystal structure of the catalytic subunit of cyclic adenosine monophosphate-dependent protein kinase. Science. 1991;253:407-414.

Domain	Description	Evalue	Bits	GA	Start	End
C1_2	C1 domain	1.6E-15	46	20.40	15	59
zf-HC5HC2H_2	PHD-zinc-finger like domain	0.00065	9	27.00	23	70
zf-HC5HC2H	PHD-like zinc-binding domain	0.00085	9	29.10	28	67
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	8.6E-05	11	27.30	31	60
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	6.7E-05	12	26.00	31	60
PHD	PHD-finger	2.9E-05	13	27.90	32	63
Zf_RING	KIAA1045 RING finger	0.00023	11	30.80	32	64
ZZ	Zinc finger, ZZ type	0.013	5	21.20	32	59
C1_2	C1 domain	5.9E-15	45	20.40	68	116
ZZ	Zinc finger, ZZ type	0.00088	8	21.20	88	111
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.0027	7	27.30	89	118
zf-HC5HC2H	PHD-like zinc-binding domain	0.013	5	29.10	89	126
zf-HC5HC2H_2	PHD-zinc-finger like domain	0.0068	6	27.00	90	121
Zf_RING	KIAA1045 RING finger	9.7E-05	12	30.80	90	155
PHD	PHD-finger	0.0068	6	27.90	90	120
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	0.0057	6	26.00	98	116
C1_2	C1 domain	4.3E-12	35	20.40	125	175
ZZ	Zinc finger, ZZ type	0.002	7	21.20	144	167
zf-HC5HC2H	PHD-like zinc-binding domain	0.13	2	29.10	146	174
zf-HC5HC2H_2	PHD-zinc-finger like domain	0.43	0	27.00	147	176
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.11	1	27.30	147	175
C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	0.00015	11	26.00	147	176
Zf_RING	KIAA1045 RING finger	0.044	3	30.80	147	175
PHD	PHD-finger	0.0012	8	27.90	148	178