c2pfam

AT2G27940.1 :

Domain Description Evalue Bits GA Start End
Ost5 Oligosaccharyltransferase subunit 5 9.8E-05 13 45.50 39 70
DC_STAMP DC-STAMP-like protein 4.9E-05 13 25.00 40 73
Tmpp129 Putative transmembrane protein precursor 0.16 1 19.10 122 159
zf-HC5HC2H_2 PHD-zinc-finger like domain 4.5E-05 14 27.00 131 168
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 5.6E-07 20 27.30 135 179
Prok-RING_1 Prokaryotic RING finger family 1 7.8E-06 16 29.10 136 169
zf-rbx1 RING-H2 zinc finger domain 1.5E-13 41 31.00 137 182
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 1.6E-08 25 27.00 137 183
FANCL_C FANCL C-terminal domain 2.1E-05 15 20.70 138 176
zf-RING_2 Ring finger domain 3E-16 50 27.30 139 182
zf-RING_11 RING-like zinc finger 1.6E-13 41 27.00 139 168
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 6.6E-12 35 27.00 140 181
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 3.5E-10 30 21.00 140 181
zf-RING_UBOX RING-type zinc-finger 1.5E-09 28 25.20 140 179
zf-RING_5 zinc-RING finger domain 1.2E-09 28 27.90 140 182
Prok-RING_4 Prokaryotic RING finger family 4 9.7E-09 25 27.00 140 184
RINGv RING-variant domain 0.00045 11 21.60 140 181
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 8.9E-07 19 21.40 152 185
Tmpp129 Putative transmembrane protein precursor 0.00013 12 19.10 168 184
FANCL_C FANCL C-terminal domain 0.95 0 20.70 177 186
Prok-RING_1 Prokaryotic RING finger family 1 0.38 1 29.10 177 183

237

Ost5
DC_STAMP
Tmpp129
zf-HC5HC2H_2
Zn_ribbon_17
Prok-RING_1
zf-rbx1
zf-C3HC4_3
FANCL_C
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
Prok-RING_4
RINGv
zf-ANAPC11
Tmpp129
FANCL_C
Prok-RING_1

References:

FANCL_C
16474167 The WD40 repeats of FANCL are required for Fanconi anemia core complex assembly. J Biol Chem. 2006;281:10896-10905.

Zn_ribbon_17

zf-HC5HC2H_2

Prok-RING_4

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

RINGv

DC_STAMP
11169400 DC-STAMP, a novel multimembrane-spanning molecule preferentially expressed by dendritic cells. Eur J Immunol 2000;30:3585-3590.

zf-ANAPC11

zf-RING_UBOX

zf-RING_5

zf-RING_2

zf-rbx1

Ost5

zf-RING_11

zf-C3HC4_3

zf-C3HC4_2

Tmpp129

Prok-RING_1

Domain	Description	Evalue	Bits	GA	Start	End
Ost5	Oligosaccharyltransferase subunit 5	9.8E-05	13	45.50	39	70
DC_STAMP	DC-STAMP-like protein	4.9E-05	13	25.00	40	73
Tmpp129	Putative transmembrane protein precursor	0.16	1	19.10	122	159
zf-HC5HC2H_2	PHD-zinc-finger like domain	4.5E-05	14	27.00	131	168
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	5.6E-07	20	27.30	135	179
Prok-RING_1	Prokaryotic RING finger family 1	7.8E-06	16	29.10	136	169
zf-rbx1	RING-H2 zinc finger domain	1.5E-13	41	31.00	137	182
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	1.6E-08	25	27.00	137	183
FANCL_C	FANCL C-terminal domain	2.1E-05	15	20.70	138	176
zf-RING_2	Ring finger domain	3E-16	50	27.30	139	182
zf-RING_11	RING-like zinc finger	1.6E-13	41	27.00	139	168
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	6.6E-12	35	27.00	140	181
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	3.5E-10	30	21.00	140	181
zf-RING_UBOX	RING-type zinc-finger	1.5E-09	28	25.20	140	179
zf-RING_5	zinc-RING finger domain	1.2E-09	28	27.90	140	182
Prok-RING_4	Prokaryotic RING finger family 4	9.7E-09	25	27.00	140	184
RINGv	RING-variant domain	0.00045	11	21.60	140	181
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	8.9E-07	19	21.40	152	185
Tmpp129	Putative transmembrane protein precursor	0.00013	12	19.10	168	184
FANCL_C	FANCL C-terminal domain	0.95	0	20.70	177	186
Prok-RING_1	Prokaryotic RING finger family 1	0.38	1	29.10	177	183