c2pfam

AT2G28830.1 :

Domain Description Evalue Bits GA Start End
U-box U-box domain 8.7E-25 76 21.40 185 254
zf-Nse Zinc-finger of the MIZ type in Nse subunit 2.6E-06 17 20.70 187 227
zf-RING_UBOX RING-type zinc-finger 2.2E-08 24 25.20 190 226
zf-NOSIP Zinc-finger of nitric oxide synthase-interacting protein 8.9E-05 12 30.00 190 217
zf-C3HC4_4 zinc finger of C3HC4-type, RING 2.4E-06 17 30.00 190 226
HEAT_2 HEAT repeats 3.4E-05 14 27.70 287 384
Arm Armadillo/beta-catenin-like repeat 1.4E-11 34 20.60 314 354
Arm_2 Armadillo-like 0.0005 9 20.40 330 404
Arm Armadillo/beta-catenin-like repeat 6.1E-06 16 20.60 358 396
Neurochondrin Neurochondrin 0.39 -2 19.10 366 386
HEAT_2 HEAT repeats 0.0032 8 27.70 368 431
KAP Kinesin-associated protein (KAP) 2.7E-06 15 19.40 374 531
Arm Armadillo/beta-catenin-like repeat 3.8E-12 36 20.60 399 437
Arm Armadillo/beta-catenin-like repeat 1.3E-05 15 20.60 441 478
Neurochondrin Neurochondrin 2.6E-07 19 19.10 452 544
Arm Armadillo/beta-catenin-like repeat 4E-08 23 20.60 481 520
HEAT_2 HEAT repeats 0.011 6 27.70 486 555
HTH_Tnp_IS1 InsA C-terminal domain 0.00011 11 24.90 528 556
Arm_2 Armadillo-like 0.8 -1 20.40 530 569

582

U-box
zf-Nse
zf-RING_UBOX
zf-NOSIP
zf-C3HC4_4
HEAT_2
Arm
Arm_2
Arm
Neurochondrin
HEAT_2
KAP
Arm
Arm
Neurochondrin
Arm
HEAT_2
HTH_Tnp_IS1
Arm_2

References:

HEAT_2

Neurochondrin
10231559 Induction of hydroxyapatite resorptive activity in bone marrow cell populations resistant to bafilomycin A1 by a factor with restricted expression to bone and brain, neurochondrin. Biochim Biophys Acta 1999;1450:92-98.

zf-C3HC4_4

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

zf-NOSIP

zf-RING_UBOX

KAP
10819327 C. elegans KLP-11/OSM-3/KAP-1: orthologs of the sea urchin kinesin-II, and mouse KIF3A/KIFB/KAP3 kinesin complexes. DNA Res 2000;7:121-125.
11912492 Identification of a link between the tumour suppressor APC and the kinesin superfamily. Nat Cell Biol 2002;4:323-327.

U-box
10704423 The U box is a modified RING finger - a common domain in ubiquitination. Curr Biol 2000;10:132-134.

HTH_Tnp_IS1

Arm_2

Arm
9298899 Three-dimensional structure of the armadillo repeat region of beta-catenin. Cell 1997;90:871-882.
8573337 Signal transduction of beta-catenin. Curr Opin Cell Biol 1995;7:634-640.
9309175 Armadillo and dTCF: a marriage made in the nucleus. Curr Opin Genet Dev 1997;7:459-466.
8259519 Association of the APC tumor suppressor protein with catenins. Science 1993;262:1734-1737.
8259518 Association of the APC gene product with beta-catenin. Science 1993;262:1731-1734.
2261639 The segment polarity gene armadillo encodes a functionally modular protein that is the Drosophila homolog of human plakoglobin. Cell 1990;63:1167-1176.

Domain	Description	Evalue	Bits	GA	Start	End
U-box	U-box domain	8.7E-25	76	21.40	185	254
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	2.6E-06	17	20.70	187	227
zf-RING_UBOX	RING-type zinc-finger	2.2E-08	24	25.20	190	226
zf-NOSIP	Zinc-finger of nitric oxide synthase-interacting protein	8.9E-05	12	30.00	190	217
zf-C3HC4_4	zinc finger of C3HC4-type, RING	2.4E-06	17	30.00	190	226
HEAT_2	HEAT repeats	3.4E-05	14	27.70	287	384
Arm	Armadillo/beta-catenin-like repeat	1.4E-11	34	20.60	314	354
Arm_2	Armadillo-like	0.0005	9	20.40	330	404
Arm	Armadillo/beta-catenin-like repeat	6.1E-06	16	20.60	358	396
Neurochondrin	Neurochondrin	0.39	-2	19.10	366	386
HEAT_2	HEAT repeats	0.0032	8	27.70	368	431
KAP	Kinesin-associated protein (KAP)	2.7E-06	15	19.40	374	531
Arm	Armadillo/beta-catenin-like repeat	3.8E-12	36	20.60	399	437
Arm	Armadillo/beta-catenin-like repeat	1.3E-05	15	20.60	441	478
Neurochondrin	Neurochondrin	2.6E-07	19	19.10	452	544
Arm	Armadillo/beta-catenin-like repeat	4E-08	23	20.60	481	520
HEAT_2	HEAT repeats	0.011	6	27.70	486	555
HTH_Tnp_IS1	InsA C-terminal domain	0.00011	11	24.90	528	556
Arm_2	Armadillo-like	0.8	-1	20.40	530	569