c2pfam

AT2G29100.1 :

Domain Description Evalue Bits GA Start End
DUF202 Domain of unknown function DUF 0.69 -1 21.30 6 23
Peripla_BP_6 Periplasmic binding protein 4.8E-25 78 31.70 30 384
Peripla_BP_5 Periplasmic binding protein domain 0.0035 5 21.60 45 106
ANF_receptor Receptor family ligand binding region 0 260 20.90 46 397
Peripla_BP_5 Periplasmic binding protein domain 0.53 -2 21.60 293 332
SBP_bac_3 Bacterial extracellular solute-binding proteins, family 3 1.1E-23 73 23.70 468 787
Peripla_BP_5 Periplasmic binding protein domain 0.03 2 21.60 491 535
Lig_chan-Glu_bd Ligated ion channel L-glutamate- and glycine-binding site 5.6E-10 28 20.30 500 549
Lig_chan Ligand-gated ion channel 0 137 24.80 566 819
DUF202 Domain of unknown function DUF 0.0022 8 21.30 570 646
DUF202 Domain of unknown function DUF 0.42 0 21.30 800 826

940

DUF202
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Peripla_BP_5
SBP_bac_3
Peripla_BP_5
Lig_chan-Glu_bd
Lig_chan
DUF202
DUF202

References:

Peripla_BP_6

DUF202

Lig_chan-Glu_bd
8428958 Molecular characterization of the family of the N-methyl-D-aspartate receptor subunits. J Biol Chem. 1993;268:2836-2843.
10465381 Subunit- and site-specific pharmacology of the NMDA receptor channel. Prog Neurobiol. 1999;59:279-298.

Lig_chan
7878472 Synaptic desensitization of NMDA receptors by calcineurin. Science 1995;267:1510-1512.

SBP_bac_3

Peripla_BP_5

ANF_receptor
8011339 Mutational analysis of the glycine-binding site of the NMDA receptor: structural similarity with bacterial amino acid-binding proteins. Neuron 1994;12:1291-1300.

Domain	Description	Evalue	Bits	GA	Start	End
DUF202	Domain of unknown function DUF	0.69	-1	21.30	6	23
Peripla_BP_6	Periplasmic binding protein	4.8E-25	78	31.70	30	384
Peripla_BP_5	Periplasmic binding protein domain	0.0035	5	21.60	45	106
ANF_receptor	Receptor family ligand binding region	0	260	20.90	46	397
Peripla_BP_5	Periplasmic binding protein domain	0.53	-2	21.60	293	332
SBP_bac_3	Bacterial extracellular solute-binding proteins, family 3	1.1E-23	73	23.70	468	787
Peripla_BP_5	Periplasmic binding protein domain	0.03	2	21.60	491	535
Lig_chan-Glu_bd	Ligated ion channel L-glutamate- and glycine-binding site	5.6E-10	28	20.30	500	549
Lig_chan	Ligand-gated ion channel	0	137	24.80	566	819
DUF202	Domain of unknown function DUF	0.0022	8	21.30	570	646
DUF202	Domain of unknown function DUF	0.42	0	21.30	800	826