c2pfam

AT1G01970.1 :

Domain Description Evalue Bits GA Start End
PPR_3 Pentatricopeptide repeat domain 0.00053 9 25.00 159 195
PPR_1 PPR repeat 0.0069 5 23.80 162 191
PPR PPR repeat 1.5E-05 14 25.00 168 196
PPR_2 PPR repeat family 3.2E-09 26 30.00 168 208
PPR_long Pentacotripeptide-repeat region of PRORP 9.4E-08 20 27.00 180 285
PPR_3 Pentatricopeptide repeat domain 1.4E-05 14 25.00 191 227
PPR_1 PPR repeat 0.013 4 23.80 194 226
PPR_2 PPR repeat family 1.7E-06 17 30.00 199 245
PPR PPR repeat 6.6E-07 18 25.00 201 230
PPR_1 PPR repeat 0.0031 6 23.80 236 261
PPR PPR repeat 3.2E-08 22 25.00 237 263
PPR_2 PPR repeat family 0.0011 8 30.00 237 263
PPR_3 Pentatricopeptide repeat domain 2.8E-06 16 25.00 256 305
PPR_long Pentacotripeptide-repeat region of PRORP 8.7E-08 20 27.00 259 386
PPR PPR repeat 0.0029 7 25.00 272 295
PPR_2 PPR repeat family 0.02 4 30.00 273 305
PPR_3 Pentatricopeptide repeat domain 1.1E-07 20 25.00 291 337
PPR_2 PPR repeat family 2.8E-05 13 30.00 303 341
PPR PPR repeat 2.9E-05 13 25.00 310 336
PPR PPR repeat 0.0061 6 25.00 346 370
PPR_2 PPR repeat family 0.021 4 30.00 346 371
PPR_1 PPR repeat 0.61 -2 23.80 352 365
PPR PPR repeat 0.48 0 25.00 384 401

409

PPR_3
PPR_1
PPR
PPR_2
PPR_long
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR_2
PPR_3
PPR_long
PPR
PPR_2
PPR_3
PPR_2
PPR
PPR
PPR_2
PPR_1
PPR

References:

PPR_long

PPR_3

PPR_2

PPR_1

PPR
7664742 The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J 1995;14:4031-4043.
8039510 A nuclear mutation in maize blocks the processing and translation of several chloroplast mRNAs and provides evidence for the differential translation of alternative mRNA forms. EMBO J 1994;13:3170-3181.
10664580 The PPR motif - a TPR-related motif prevalent in plant organellar proteins. Trends Biochem Sci 2000;25:45-47.

Domain	Description	Evalue	Bits	GA	Start	End
PPR_3	Pentatricopeptide repeat domain	0.00053	9	25.00	159	195
PPR_1	PPR repeat	0.0069	5	23.80	162	191
PPR	PPR repeat	1.5E-05	14	25.00	168	196
PPR_2	PPR repeat family	3.2E-09	26	30.00	168	208
PPR_long	Pentacotripeptide-repeat region of PRORP	9.4E-08	20	27.00	180	285
PPR_3	Pentatricopeptide repeat domain	1.4E-05	14	25.00	191	227
PPR_1	PPR repeat	0.013	4	23.80	194	226
PPR_2	PPR repeat family	1.7E-06	17	30.00	199	245
PPR	PPR repeat	6.6E-07	18	25.00	201	230
PPR_1	PPR repeat	0.0031	6	23.80	236	261
PPR	PPR repeat	3.2E-08	22	25.00	237	263
PPR_2	PPR repeat family	0.0011	8	30.00	237	263
PPR_3	Pentatricopeptide repeat domain	2.8E-06	16	25.00	256	305
PPR_long	Pentacotripeptide-repeat region of PRORP	8.7E-08	20	27.00	259	386
PPR	PPR repeat	0.0029	7	25.00	272	295
PPR_2	PPR repeat family	0.02	4	30.00	273	305
PPR_3	Pentatricopeptide repeat domain	1.1E-07	20	25.00	291	337
PPR_2	PPR repeat family	2.8E-05	13	30.00	303	341
PPR	PPR repeat	2.9E-05	13	25.00	310	336
PPR	PPR repeat	0.0061	6	25.00	346	370
PPR_2	PPR repeat family	0.021	4	30.00	346	371
PPR_1	PPR repeat	0.61	-2	23.80	352	365
PPR	PPR repeat	0.48	0	25.00	384	401