c2pfam

AT2G30410.1 :

Domain Description Evalue Bits GA Start End
Cluap1 Clusterin-associated protein-1 3.1E-06 16 24.00 4 106
Helo_like_N Fungal N-terminal domain of STAND proteins 0.099 1 27.20 4 26
APG6_N Apg6 coiled-coil region 4.2E-05 14 45.00 4 106
BST2 Bone marrow stromal antigen 2 0.00018 12 27.00 4 51
TBCA Tubulin binding cofactor A 9.8E-32 99 23.20 7 89
Dynamitin Dynamitin 0.0028 6 21.10 14 51
Spc24 Spc24 subunit of Ndc80 0.015 5 22.00 16 43
Filament Intermediate filament protein 1.2E-05 14 40.00 33 108
PMEI Plant invertase/pectin methylesterase inhibitor 9.8E-05 12 26.70 44 101
Spc7 Spc7 kinetochore protein 8.2E-05 11 34.00 47 107
BST2 Bone marrow stromal antigen 2 0.05 4 27.00 48 106
Helo_like_N Fungal N-terminal domain of STAND proteins 4.6E-05 12 27.20 49 94
Spc24 Spc24 subunit of Ndc80 0.00067 9 22.00 67 99
Dynamitin Dynamitin 0.00032 9 21.10 73 109

113

Cluap1
Helo_like_N
APG6_N
BST2
TBCA
Dynamitin
Spc24
Filament
PMEI
Spc7
BST2
Helo_like_N
Spc24
Dynamitin

References:

Dynamitin
12082093 Dynamitin controls Beta 2 integrin avidity by modulating cytoskeletal constraint on integrin molecules. J Biol Chem 2002;277:32963-32969.

PMEI
8521860 A glycoprotein inhibitor of pectin methylesterase in kiwi fruit. Purification by affinity chromatography and evidence of a ripening-related precursor. Eur J Biochem 1995;233:926-929.
10880981 Kiwi protein inhibitor of pectin methylesterase amino-acid sequence and structural importance of two disulfide bridges. Eur J Biochem 2000;267:4561-4565.

Spc7
15371542 The fission yeast kinetochore component Spc7 associates with the EB1 family member Mal3 and is required for kinetochore-spindle association. Mol Biol Cell 2004;15:5255-5267.

Cluap1
15480429 Isolation and characterization of a novel gene CLUAP1 whose expression is frequently upregulated in colon cancer. Oncogene. 2004;23:9289-9294.

BST2

APG6_N

TBCA
10542094 Crystal structure of the post-chaperonin beta-tubulin binding cofactor Rbl2p. Nat Struct Biol 1999;6:1029-1032.

Spc24
11266451 The Ndc80p complex from Saccharomyces cerevisiae contains conserved centromere components and has a function in chromosome segregation. J Cell Biol 2001;152:349-360.

Filament
8771189 Intermediate filament proteins. Protein Profile 1995;2:801-951.

Helo_like_N

Domain	Description	Evalue	Bits	GA	Start	End
Cluap1	Clusterin-associated protein-1	3.1E-06	16	24.00	4	106
Helo_like_N	Fungal N-terminal domain of STAND proteins	0.099	1	27.20	4	26
APG6_N	Apg6 coiled-coil region	4.2E-05	14	45.00	4	106
BST2	Bone marrow stromal antigen 2	0.00018	12	27.00	4	51
TBCA	Tubulin binding cofactor A	9.8E-32	99	23.20	7	89
Dynamitin	Dynamitin	0.0028	6	21.10	14	51
Spc24	Spc24 subunit of Ndc80	0.015	5	22.00	16	43
Filament	Intermediate filament protein	1.2E-05	14	40.00	33	108
PMEI	Plant invertase/pectin methylesterase inhibitor	9.8E-05	12	26.70	44	101
Spc7	Spc7 kinetochore protein	8.2E-05	11	34.00	47	107
BST2	Bone marrow stromal antigen 2	0.05	4	27.00	48	106
Helo_like_N	Fungal N-terminal domain of STAND proteins	4.6E-05	12	27.20	49	94
Spc24	Spc24 subunit of Ndc80	0.00067	9	22.00	67	99
Dynamitin	Dynamitin	0.00032	9	21.10	73	109