c2pfam

AT2G30580.1 :

Domain Description Evalue Bits GA Start End
zf-RING_5 zinc-RING finger domain 0.24 2 27.90 16 25
zf-Nse Zinc-finger of the MIZ type in Nse subunit 3.2E-05 14 20.70 17 60
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.0058 7 27.30 17 59
zf-RING_6 zf-RING of BARD1-type protein 9.9E-05 13 35.00 18 60
Rad50_zn_hook Rad50 zinc hook motif 0.062 3 21.60 19 30
Prok-RING_4 Prokaryotic RING finger family 4 0.038 4 27.00 19 30
zf-rbx1 RING-H2 zinc finger domain 0.0011 10 31.00 19 60
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.00081 10 21.40 19 60
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 5.9E-06 16 27.00 19 61
zf-RING_10 zinc RING finger of MSL2 1.5E-05 15 31.00 19 61
zf-RING_2 Ring finger domain 4.2E-08 24 27.30 19 60
zf-C3HC4_4 zinc finger of C3HC4-type, RING 8E-08 23 30.00 20 60
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 2.7E-11 33 27.00 20 60
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 6.3E-10 29 21.00 20 60
zf-RING_UBOX RING-type zinc-finger 1.9E-08 25 25.20 20 52
zf-RING_5 zinc-RING finger domain 4.3E-07 20 27.90 20 61
Prok-RING_4 Prokaryotic RING finger family 4 0.00074 10 27.00 20 61
zf-RING_4 RING/Ubox like zinc-binding domain 0.00026 11 27.00 20 60
zf-C3HC4_5 Zinc finger, C3HC4 type (RING finger) 0.0052 7 27.00 34 60
Rad50_zn_hook Rad50 zinc hook motif 0.0024 8 21.60 47 66

420

zf-RING_5
zf-Nse
Zn_ribbon_17
zf-RING_6
Rad50_zn_hook
Prok-RING_4
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-RING_10
zf-RING_2
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
Prok-RING_4
zf-RING_4
zf-C3HC4_5
Rad50_zn_hook

References:

Zn_ribbon_17

Prok-RING_4

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-ANAPC11

zf-C3HC4_2

Rad50_zn_hook
12152085 The Rad50 zinc-hook is a structure joining Mre11 complexes in DNA recombination and repair. Nature 2002;418:562-566.
12151226 Tethering on the brink: the evolutionarily conserved Mre11-Rad50 complex. Trends Biochem Sci 2002;27:410-418.

zf-RING_6

zf-RING_5

zf-RING_4

zf-RING_2

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

zf-C3HC4_5

zf-RING_10

zf-C3HC4_3

zf-rbx1

zf-RING_UBOX

zf-C3HC4_4

Domain	Description	Evalue	Bits	GA	Start	End
zf-RING_5	zinc-RING finger domain	0.24	2	27.90	16	25
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	3.2E-05	14	20.70	17	60
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.0058	7	27.30	17	59
zf-RING_6	zf-RING of BARD1-type protein	9.9E-05	13	35.00	18	60
Rad50_zn_hook	Rad50 zinc hook motif	0.062	3	21.60	19	30
Prok-RING_4	Prokaryotic RING finger family 4	0.038	4	27.00	19	30
zf-rbx1	RING-H2 zinc finger domain	0.0011	10	31.00	19	60
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.00081	10	21.40	19	60
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	5.9E-06	16	27.00	19	61
zf-RING_10	zinc RING finger of MSL2	1.5E-05	15	31.00	19	61
zf-RING_2	Ring finger domain	4.2E-08	24	27.30	19	60
zf-C3HC4_4	zinc finger of C3HC4-type, RING	8E-08	23	30.00	20	60
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	2.7E-11	33	27.00	20	60
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	6.3E-10	29	21.00	20	60
zf-RING_UBOX	RING-type zinc-finger	1.9E-08	25	25.20	20	52
zf-RING_5	zinc-RING finger domain	4.3E-07	20	27.90	20	61
Prok-RING_4	Prokaryotic RING finger family 4	0.00074	10	27.00	20	61
zf-RING_4	RING/Ubox like zinc-binding domain	0.00026	11	27.00	20	60
zf-C3HC4_5	Zinc finger, C3HC4 type (RING finger)	0.0052	7	27.00	34	60
Rad50_zn_hook	Rad50 zinc hook motif	0.0024	8	21.60	47	66